Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00489 ATGAGCAGCGAAAAGGAAAAAACCTCTGCACCTTCTTCTTCTGCTTACGTTGAGTTCTGCAAAGGAGTCAATGGCCTCGAGAAGGTTATCCTCCGCGAATCGCGTGGCTCCTCTGCCGAGGTGTATTTGTACGGTGCTCACGTGACTTCGTGGAAGAACGACCACGGCGAGGAATTGCTTTTTCTCAGTAGTAAGGCTGTATTTAAGCCTCCAAAGGCAATTCGTGGAGGGATTCCAATTTGCTTTCCTCAATTTGGAGGCCTTGGCACTCTTGACCAACATGGATTTGCTAGAAATCGATTGTGGACCATTGACGATGATCCTCCTCCATTTCCAACAAGTACTTTGAGCAAAGCCTTTGTTGATTTGTTACTTAAGCCCTCTGAAGAAGACTCGAAGAATTGGCCTCACTGTTTTGAATACCGTCTTAGGGTAGCTTTGGGACCTGGAGGAGATCTGATGTTGACGTCACGGATCAGGAACACAAACAGCGACGGAAAACCATTTTCATTCACCTTTGCATATCATACATATTTCTCTGTATCAGACATAAGTGAAGTTCGAGTGGAGGGATTGGAGACCCTGGATTATCTTGATAATTTGCAGAACAAGGATCGCTTTACTGAACAGGGGGATGCGTTAACGTTTGAATCAGAAGTAAGATCAGTCTTTCCCTTGTCTTTTGTTTCAGGAAGCAAGACACCGATAATGAGTGTTGACAAGATATATCTTAGCACTCCCACAAAGATTGCAATTATTGATCATGAAAAAAAGAGAACGTTTGTTGTGCGTAAAGATGGCCTTCCTGATGCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGGCCATGGCTGATTTTGGTGATGATGAGTACAAGTACATGCTCTGTGTAGAGGCTGCTGCTATTGAGAAGCCTATCACTTTGAAACCTGGAGAAGAATGGAAAGGAAGGTTAGAGCTTTCAGCTGTTCCTTCGAGTTATTGCAGTGGACAACTTGATCCCCAGAGAGTTCTACTGGGAAGCTGA 1029 0.4441 MSSEKEKTSAPSSSAYVEFCKGVNGLEKVILRESRGSSAEVYLYGAHVTSWKNDHGEELLFLSSKAVFKPPKAIRGGIPICFPQFGGLGTLDQHGFARNRLWTIDDDPPPFPTSTLSKAFVDLLLKPSEEDSKNWPHCFEYRLRVALGPGGDLMLTSRIRNTNSDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKDRFTEQGDALTFESEVRSVFPLSFVSGSKTPIMSVDKIYLSTPTKIAIIDHEKKRTFVVRKDGLPDAVVWNPWDKKAKAMADFGDDEYKYMLCVEAAAIEKPITLKPGEEWKGRLELSAVPSSYCSGQLDPQRVLLGS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00489 342 Pfam Aldose 1-epimerase 29 321 IPR008183 GO:0005975|GO:0016853
Lapu9g00489 342 Gene3D - 24 328 IPR014718 GO:0030246
Lapu9g00489 342 PIRSF PHexose_mutarotase 2 328 IPR025532 -
Lapu9g00489 342 CDD D-hex-6-P-epi_like 29 322 IPR025532 -
Lapu9g00489 342 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 18 327 - -
Lapu9g00489 342 SUPERFAMILY Galactose mutarotase-like 24 321 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00489 Lapu-Chr9 5467963 5475464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00489 K01792 - gmx:100807970 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00596 3 6155630 6162541 Lapu9g00489 9 5467963 5475464 PCT