Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00596 ATGAGTACGGAAAAGGCTCCTTCACCAGCTTCTTCTTCTTCTTCTACTTCCAGTAACTACGAGGTGTGCAAGGGATTCAATGGCCTCGATAAGGTTCTTCTTCGTGACGCTCGTGGAAGCTCCGCTGAGGTGTACTTGTACGGTGGTCATGTGACTTCCTGGAAGAATGACCAAGCCGAGGAATTACTTTTTCTCAGCAGCAAGGCTATATTTAAGCCTCCAAAGGCAATTCGTGGAGGGATTCCGATATGTTTTCCTCAATTTGCAAACTTTGGTACTCTTGACTCACATGGATTTGCCAGAAACCGGTTCTGGACCATTGATGATAATCCTCCACCTTTTCCAACAAGTACTTTGAGTAAAGCCTTTGTTGATTTGATTCTTAAACCATCGGAAGACGACATTAAGATTTGGCCTCACAGTTTTGAGTTTCGTCTTAGAGTAGCTCTTGGACCTGGAGGAGAGCTAATGTTGACATCTCGGATCAGGAACACTAACGTTGATGGGAAGCCATTTTCATTCACATTTGCTTATCATACATATTTCTCTGTGTCAGATATAAGTGAAGTGCGGGTAGAGGGGTTAGAGACATTGGATTATCTTGACAACTTACAGAAAAGGGAACGCTTTACTGAACAGGGGGATGCTTTAACATTTGAATCGGAGGTTGACAGGATATATCTCAGCACTCCTACAAAGATTGCAATTCTTGATCATGAGAAGAAGAGAACATTTGTATTACGTAAAGATGGTCTTCCTGATTCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGGCTATGTCTGATTTTGGTGATGACGAGTATAAGCATATGCTTTGTGTAGAGGCAGCTGCTATTGAAAAGCCTATTACTTTGAAACCTGGCGAGGAATGGAAGGGAAGACTAGAACTTTCAACTGTTCCTTCTAGTTATTGTAGTGGACAGCTAGATCCCCGAAGAGTTATTCAAGGAAGCTGA 981 0.4251 MSTEKAPSPASSSSSTSSNYEVCKGFNGLDKVLLRDARGSSAEVYLYGGHVTSWKNDQAEELLFLSSKAIFKPPKAIRGGIPICFPQFANFGTLDSHGFARNRFWTIDDNPPPFPTSTLSKAFVDLILKPSEDDIKIWPHSFEFRLRVALGPGGELMLTSRIRNTNVDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQKRERFTEQGDALTFESEVDRIYLSTPTKIAILDHEKKRTFVLRKDGLPDSVVWNPWDKKAKAMSDFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSTVPSSYCSGQLDPRRVIQGS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00596 326 FunFam Glucose-6-phosphate 1-epimerase 27 312 - -
Lapu3g00596 326 CDD D-hex-6-P-epi_like 36 306 IPR025532 -
Lapu3g00596 326 PIRSF PHexose_mutarotase 9 312 IPR025532 -
Lapu3g00596 326 Pfam Aldose 1-epimerase 30 305 IPR008183 GO:0005975|GO:0016853
Lapu3g00596 326 Gene3D - 27 312 IPR014718 GO:0030246
Lapu3g00596 326 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 24 311 - -
Lapu3g00596 326 SUPERFAMILY Galactose mutarotase-like 25 305 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00596 Lapu-Chr3 6155630 6162541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00596 K01792 - gmx:100787970 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00596 3 6155630 6162541 Lapu9g00489 9 5467963 5475464 PCT