Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00484 ATGGGATGTTCACATTCAAGATTGGATGATGAAGAGGCGGTTCAGCTTTGTAGAGACAGAAAGAAGTTCATCAAACAAGCTGTAGAACAAAGGACTCGGTTGGCCACTGGACACATAGCATACATAGAATCTCTGAAAAGAGTTTCAGCAGCACTTCGTGATTACATTGAAGGTGATGAACCTCGCGAGTTCTCATTGGACACGGCCATCACCCCACCTTTCACACCTGTGAAGAAGAAAAGTGGCCAAGGATTCATTCCCATATCAGCAAAACCCTTCGCAGCAACAGCAGCTATTGAGTTTGGGATCGGACCAAACTCTACTTTGAAAGTGAATTACCTTAGACCTGGTGGTAACCCAGCAATTTCAGTTGAGGAAAGGCCTCAATCCCCGGAAATGGTCCGTGTTGAGACATATTATTCTCCAATGCAGCAGTATGGCATTGATGGATTTTTCAACATGCAATCCTCTCCAGTGAATCCCTCAATTTTTTCCTATTCTCCCAATAATAGGCCTAATATTCCTCCCCCTTCACCTCAAGCATCCCAATGGGATTTCTTTTGGAACCCCTTTTCGTCGTTGGACAGTTATGGTTATCCTGCAAAACCTATTGACCATACTACAATGGATGATGAGTACAGAGGACTTAGGCAGGTTAGAGAAGAAGAAGGAATACCAGACCTGGAAGAAGATGAAACTGAACATGAAGATTGTGTTGGAAAGAGAAATGTAGCAGATGAAAGAACTAGACCTAGCGGGAATTCTTCCAAAGAAGAAGTTATTGTTGAAGATGATGATGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGACAACGAGGAGGAAGAAACAGACATTGAAGATGAAACTGAAACTGAGCATGTTGCCAAAGATTCTCAAGCTCAAGGAAGTGCAAGTTTTGAAGTATCAAAATCTCAAGCTAATGGTCATATTGAATCCAGCCATAGAGAAATGACAATTGGTAAGCAAGAAGCTCTGGAAGAGACACCAGGTTTTACTGTTTACGTAAACCGAAGGCCAACAAGCATGGCAGAAGTGATTAGTGATCTTGAAACTCAATTCACAATCGTCTACAATGCAGCTAATGATGTCGCAGCATTGTTAGAGGCCAAGAAATCTCAATATTTGTTGACTTCTAATCAACTTTCAGGATCAAAGTTGTTGAACCCGGTAGCTCTGCTTCGATCAGCTTCTTCACGCTCTTCTTCATCAAGATATTTGGTAAATTGTTCAAACACTAGCAAGGAAGGTTGTGATGGTACAAAGGAACTCTCAGAGGAACATTGTATGTTATCTGGTAGTCACCACTCCACATTGGACAGATTAAATACATGGGAGAAGAAACTATATGAGGAAGTCAGGTCTGGAGAGCGTGTCCGAATTGCATATGAGAAGAAATGTAAGCAGCTCAGGAACTTTGATGTAAAAGGAGAGGACCCCTCTTGTGCAGATAAAGCAAGAGCAGCCATTAGAGATCTTGACACCCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCAAGGCGAATTGAAACTCTAAGGGATGAAGAGTTATATCCCCAACTTCTTGAATTGGTGCAAGGGCTGAAAAGGATGTGGAAAGTGATGGCACAATGCCATCAGAAACAGAAGAGAACTCTAGATGAAGCTAAGATTCTTCTAGCTGGCACTTATTCGAAATTACATGCTCGAAAACAGTCTTCCATGTTAATGACAGATCCAAACAGGCTAGCTCGTGCAGCCTCCAATCTTGAATTTGAGCTGAGGAACTGGAGAAACTCCTTTGAGTCATGGATCACTTCTCAAAGATCCTATATTCATGCACTAACTGGATGGCTTCTTCGGTGCATGAGATCCGAGCCTGATGTATCCAAGTTACCATGCTCTCCACGGAGGTCTAGTGGCACTCACCCTTTGTTTGGACTCTGTGTTCAGTGGTCAAGACGCCTAGATGCCATACAAGAAAAGGCAGTGCTTGATGGCTTAGACTTTTTTGCAGCTGGGATGGGGTCCCTCTATGCGCATCAGTTAAGAGAAGATTCTAGGAGAAACTCATTTGGACCAAAACAAAGTAATGGCAATATGGAATTAGTGGAAGCTGGTGAGGTGGAAGAGGTAATGGCTCCAGAGAAACTGGCTGAAGTTGCTATTAAGGTGCTTTGTGCTGGAATGTCTGTTGCTATTAGCTCACTGGCAGAGTTTGCTTTGGATTCTGCTGAGGCATACAATGAAGTTGTTAAGCAATGGGACAATGTGAAGTGTCAAAATACTACTTCTAGAGAAACCAGAACTTAG 2325 0.4267 MGCSHSRLDDEEAVQLCRDRKKFIKQAVEQRTRLATGHIAYIESLKRVSAALRDYIEGDEPREFSLDTAITPPFTPVKKKSGQGFIPISAKPFAATAAIEFGIGPNSTLKVNYLRPGGNPAISVEERPQSPEMVRVETYYSPMQQYGIDGFFNMQSSPVNPSIFSYSPNNRPNIPPPSPQASQWDFFWNPFSSLDSYGYPAKPIDHTTMDDEYRGLRQVREEEGIPDLEEDETEHEDCVGKRNVADERTRPSGNSSKEEVIVEDDDEEEEEEEEEEEEEDNEEEETDIEDETETEHVAKDSQAQGSASFEVSKSQANGHIESSHREMTIGKQEALEETPGFTVYVNRRPTSMAEVISDLETQFTIVYNAANDVAALLEAKKSQYLLTSNQLSGSKLLNPVALLRSASSRSSSSRYLVNCSNTSKEGCDGTKELSEEHCMLSGSHHSTLDRLNTWEKKLYEEVRSGERVRIAYEKKCKQLRNFDVKGEDPSCADKARAAIRDLDTQITVSIHSVEAISRRIETLRDEELYPQLLELVQGLKRMWKVMAQCHQKQKRTLDEAKILLAGTYSKLHARKQSSMLMTDPNRLARAASNLEFELRNWRNSFESWITSQRSYIHALTGWLLRCMRSEPDVSKLPCSPRRSSGTHPLFGLCVQWSRRLDAIQEKAVLDGLDFFAAGMGSLYAHQLREDSRRNSFGPKQSNGNMELVEAGEVEEVMAPEKLAEVAIKVLCAGMSVAISSLAEFALDSAEAYNEVVKQWDNVKCQNTTSRETRT* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00484 774 MobiDBLite consensus disorder prediction 235 259 - -
Lapu9g00484 774 MobiDBLite consensus disorder prediction 260 291 - -
Lapu9g00484 774 MobiDBLite consensus disorder prediction 223 332 - -
Lapu9g00484 774 Pfam Protein of unknown function (DUF632) 352 679 IPR006867 -
Lapu9g00484 774 PANTHER UNCHARACTERIZED 1 758 - -
Lapu9g00484 774 Coils Coil 257 294 - -
Lapu9g00484 774 MobiDBLite consensus disorder prediction 299 322 - -
Lapu9g00484 774 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00484 Lapu-Chr9 5389408 5394553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00484 1 231 Acyl Lipid Metabolism Gene Families AT2G27090 29.876 1.08e-16 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00484 - - gmx:100780704 1293.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00484 9 5389408 5394553 Lapu9g00484 9 5389408 5394553 ECH
Lapu3g00589 3 6089576 6094360 Lapu9g00484 9 5389408 5394553 PCT