Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00589 ATGGGATGTTCTCAATCAAGGTTGGATGATGAAGAGGCAGTCAAGCTTTGCAAAGATAGAAAACGTTTCATCAAACAGGCTGTTGAGCAAAGAGCTCAATTTGCTACTGAACACGTAGCATACATTCAGTCTCTGAAAAGGGTTTCAGCTGCACTGTTAGATTACTTTGAAGGTGATGATGAGTCACACCATTTGCCATTAGATTCATTCATAAGCCCACCTTCCACACCTGTGAAGAAAACCAGTCCTCTTGGCTTCATTCCCATATCATCAAAATCCTTCAGCCCAACAAAAATTGAGTTTGATCCCAAAACAACTTTGAAGGTGAATTACTTAAGGTCGGGTGGTAATCCAGCAATTTCAGTTGAGGAAAGGCCTCAATCGCCTGAAATGGTTCGGGTTGAAACATATTATCCCATGCACCAGTTTGGCATTGATGGTTTCTTTCCTATGCAATCCTCACCTATGAATTCCTCAATTTTTGCCTATTCTCCCAATAATAGGCCTAACATCCCTCCTCCTTCACCTCAATCTTCCCAATGGGAATCATTTTGGAACCCGTTTTCATCATTGGACTATTATGGTTACCCCACCCGAATTAGCTTTGACCAGACTGGAATGGATAATGAGATCGGAGGACTGAGGCAGGTCCGAGAAGAAGAAGGAATACCAGACCTGGAAGAAGATGGAACTGAACAAGAGGATTTTGTTGAAAAGAGAAATGTAACAGAAGTAAGAGCCAAAATTGATGTAAACCCCTCCAAAGAAGAAGTCACAGTTGAAGATGTTGATGAACACAAGGAGGAAGTGGAGGCAACGGCTGCTGAAACTGGAACTGTGAATGAAGTCGCAGAACAAGCCAATGGCGGTGAATGTTTTCAAGTATCTAAAGCTCAAACTTCTGGTCAGGAAATGGAAACTGGTAATCAAGAAGCCAAGGAAGAAACACCTGGTTTTACTGTTTATGTAAACCGAAGACCAACAAGCATGGCTGAAGTGATCAGGGATCTTGAAGCTCAATTCACAATAATCTGCAATGTGGCTAATGATGTCTCCGCATTGTTAGAGGCCAAGAAATCTCAGTATTTATCATCATCAAATGAACTGTCAGCATCAAAATTGTTGAACCCAATAGCGCTGTTCCGCTCAGCCTCATTACGATCATCCTCATCAAGATTTTTAACGAATTCTTCAAACACTACAGATGAGGATTTCGAAAGCACCGATGATCCATCAGAGGAAGATTGTTTGTTTTCTGTTAGTCACCAGTCAACGTTGGACAGGTTATATGCTTGGGAGAAGAAACTATACGAGGAAGTCAGGTCTGGAGAACGTGTTCGAATGGCATATGACAAGAAATGTCAGCAACTCAGGAATCATGATGTCAATGGAGAGGAACCCTCTTTCCTTGATAAAACAAGAGCTGCTATTAGAGATCTACATACCCAGATAACAGTTTCTATACATTCAGTTGAATCTATTTCCAGGAGAATTGAAACTCTAAGGGATGAGGAATTGCATCCCCAGCTTCTTGAATTGGTGCAAGGGCTTGCGAAGATGTGGAAAGTGATGGCGGAATGTCATCAGGCACAGCAGAGAACCTTAACGGAAGCCAAGATTCTTCTCGTTGACACCGATGCCAGAAAACAGTGTGCCACATCACTAACTGATCCTCAAAGGCTTGCTCGTTCAACCTCCAATCTTGAAACTGAATTGAGGCATTGGCGAAACACCTTTGAGTCATGGATCAGTTCTCAAAGATCATATATCCATGCTCTAACTGGCTGGCTTCTCAGATGTGTGAGATGCGAGCATGATCCGTCAAAGCTAGCATGCTCTCCTCGTAGGTCTAGTGGCACTCATCCATTATTTGGACTTTGTGTTCAGTGGTCAAGGCGTCTAGATGCCCTCCAAGAAACTGCAGTACTTAATGGCATAGACATTTTTGCAGCTGGCATAGGGTCCTTCTATGTGCAACAATCAAGAGAAGAGACTCGAAGAAATCCAGTTGGATCAAAAGAACATGATGAGAATATGAAAATGATGGAAGTTGGTCATGTTGAAGAGGTGATGAGTACTGAGAAATTGGCTGAAGTTGCTATAGAGGTGCTCTGTGTTGGTATGTCAACTGCTATGAGCTCAATGGCAGAGTTTGCTGTTGATTATGCTGAAGGATACAATGAACTTGTTAAGAAATGGGAGAATGTGAACTTGCACCAGATTTCTTGTGGAACTGATACATAG 2244 0.4234 MGCSQSRLDDEEAVKLCKDRKRFIKQAVEQRAQFATEHVAYIQSLKRVSAALLDYFEGDDESHHLPLDSFISPPSTPVKKTSPLGFIPISSKSFSPTKIEFDPKTTLKVNYLRSGGNPAISVEERPQSPEMVRVETYYPMHQFGIDGFFPMQSSPMNSSIFAYSPNNRPNIPPPSPQSSQWESFWNPFSSLDYYGYPTRISFDQTGMDNEIGGLRQVREEEGIPDLEEDGTEQEDFVEKRNVTEVRAKIDVNPSKEEVTVEDVDEHKEEVEATAAETGTVNEVAEQANGGECFQVSKAQTSGQEMETGNQEAKEETPGFTVYVNRRPTSMAEVIRDLEAQFTIICNVANDVSALLEAKKSQYLSSSNELSASKLLNPIALFRSASLRSSSSRFLTNSSNTTDEDFESTDDPSEEDCLFSVSHQSTLDRLYAWEKKLYEEVRSGERVRMAYDKKCQQLRNHDVNGEEPSFLDKTRAAIRDLHTQITVSIHSVESISRRIETLRDEELHPQLLELVQGLAKMWKVMAECHQAQQRTLTEAKILLVDTDARKQCATSLTDPQRLARSTSNLETELRHWRNTFESWISSQRSYIHALTGWLLRCVRCEHDPSKLACSPRRSSGTHPLFGLCVQWSRRLDALQETAVLNGIDIFAAGIGSFYVQQSREETRRNPVGSKEHDENMKMMEVGHVEEVMSTEKLAEVAIEVLCVGMSTAMSSMAEFAVDYAEGYNELVKKWENVNLHQISCGTDT* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00589 747 PANTHER UNCHARACTERIZED 1 732 - -
Lapu3g00589 747 Pfam Protein of unknown function (DUF632) 330 653 IPR006867 -
Lapu3g00589 747 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lapu3g00589 747 MobiDBLite consensus disorder prediction 392 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00589 Lapu-Chr3 6089576 6094360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00589 1 683 Acyl Lipid Metabolism Gene Families AT2G27090 28.167 4.34e-70 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00589 - - gmx:100818631 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00589 3 6089576 6094360 Lapu3g00589 3 6089576 6094360 ECH
Lapu3g00589 3 6089576 6094360 Lapu9g00484 9 5389408 5394553 PCT