Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00478 ATGGGAGCCTGTTTTTCTTCTAAACCATCCTCCACAACCAACAATGTCCGTTTGGTTCATCTGAGTGGTTATGTGGAGGATTTTGAGCAGCCAATTTCAGTGAGCCAACTCACTGCCACTTTTCCAAAGCACTTCGTTTGTACCTCAGTTCAGCTTCTTTCACCTTGCTCAAAACCATTGAATGGGGACACCCAACTCCAACCTGGGAATGTGTACTTCATGCTACCATACTCAATCCTTCAAGCTGATGTTTCTCCTGTGGACTTGGCTTCCCTTGCAAAGAGGCTCACTGCAATAGCCAAAACTAGAAAAAACTCCTCACTCAAAGATGGTCCTTTCTCTAGCCAACATGAGTTGAGCAATGTTTGGAGTTCGCCTTCAAGGAGTCCTGGAAGGCTTGGTGTGGTTGAGCGAAGCCCTTGTCGAGTGCAGCCATGGAAACCTATCTTGGACACCATCAGAGAGAAGTCATTCAATCGGAGAAGCGAATCAGATTTGCAAGAACATAATTGA 513 0.4581 MGACFSSKPSSTTNNVRLVHLSGYVEDFEQPISVSQLTATFPKHFVCTSVQLLSPCSKPLNGDTQLQPGNVYFMLPYSILQADVSPVDLASLAKRLTAIAKTRKNSSLKDGPFSSQHELSNVWSSPSRSPGRLGVVERSPCRVQPWKPILDTIREKSFNRRSESDLQEHN* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00478 170 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 155 - -
Lapu9g00478 170 Pfam PADRE domain 1 155 IPR025322 -
Lapu9g00478 170 MobiDBLite consensus disorder prediction 106 128 - -
Lapu9g00478 170 MobiDBLite consensus disorder prediction 106 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00478 Lapu-Chr9 5270579 5271114 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00478 - - gmx:100810460 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00478 9 5270579 5271114 Lapu9g00478 9 5270579 5271114 ECH
Lapu3g00586 3 6006934 6007446 Lapu9g00478 9 5270579 5271114 PCT