Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00586 ATGGGGGCTTGCTTTTCTTGTAACTCTTCCTCCATAGCAAAGAATATCCGTGTGGTTCATATGAATGGTTTTGTAGAGGATTTTGAGCAACCAATTTCAGTGAGGCAAGTAATTGGGTACCCCTCAAAACACTTTGTTTGCACTTCCACACAGCTTCTTTCCACTTCCTCAAAATCAATGAATGGAGACACACATCTCCAACCCGGGCAAGTGTATTTCATGCTGCCATACTCAGTACTACAAGCTGATGTTTCTCCTCTGGACCTGGCTGGGCTTGTAAAGAGACTCAGCGCAATAGCCAAAGCAAGTCCTTTGTCGAGCCAAAATCAAGCAGTGTGTTCACCTTCTAGCAGTCCTAGCAAAGCTGTTGTGGCAGAGCAATATGGTGTTGGTAAGACGAATATTGGTGGAAGAAGCCCTTGTAAAGTACAACCTTGGAAACCTATCTTGGACACCATATCAGAGAAGCCATTTCATATGAGGAGTGAATCGGATTGA 498 0.4418 MGACFSCNSSSIAKNIRVVHMNGFVEDFEQPISVRQVIGYPSKHFVCTSTQLLSTSSKSMNGDTHLQPGQVYFMLPYSVLQADVSPLDLAGLVKRLSAIAKASPLSSQNQAVCSPSSSPSKAVVAEQYGVGKTNIGGRSPCKVQPWKPILDTISEKPFHMRSESD* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00586 165 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 155 - -
Lapu3g00586 165 Pfam PADRE domain 1 155 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00586 Lapu-Chr3 6006934 6007446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00586 - - gmx:100785670 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00586 3 6006934 6007446 Lapu3g00586 3 6006934 6007446 ECH
Lapu3g00586 3 6006934 6007446 Lapu9g00478 9 5270579 5271114 PCT