Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00462 ATGTGGTTTTCCTTCTGGAGATCCCGAGATCGTTTTTCCTTGGATCATCTCAGGTACTTAACTGATCAATTGACGAAAGTTCAAACAGTTAACGAGGTTAATAAGGATTTTGTTATCGAGGCACTGAGATCTATTGCAGAGTTGATAACATATGGCGACCAACACGACCCAAGTTTTTTTGAATTCTTCATGGAAAAGCAAGTTGTGGGAGAATTTGTACGTGTTCTTAAACTCAGCAGAAGTATTAGTATTCCACTTCAGTTACTGCAAACAGTGAGCATTATGATCCAGAACCTAAGAAGTGAACATGCTATATATTATATGTTTAGTAATGAACATATGAACTACCTAATTACGTATTCATTTGATTTCCGGAACGAAGAGCTACTGTCATACTACATATCCTTTTTAAGAGCAATAAGCGGAAAATTGAACAAAAATACAATTTCTCTTCTTGTGAAGACTCGCAACGATGAAGTAGTTTCATTTCCACTGTATGTTGAGGCAATACGCTTTGCTTTTCATGAGGAGAACATGGTCCGCACTGCTGTACGTACTGTGACCCTTAATGTTTATCATGTTGGGGATGAATGTGTTAATAGATATATAACCAGCGCACCGCACACAGAATACTTCTCAAACCTGGTTTCATTTTTTAGGAATCAATGTATGGATTTAAATAGACTGGTGTCTGAGACACTAAAAAATCCAGGCTCAGATTCAACCTCTGCAATAATTGCTGCTGTAGATGAAATTGAAGATAACCTGTATTACTTTAGCGATGTTATCTCGGCTGGGATTCCTGATGTTGGGAGGCTAATAACAGACAGCATTTTGATGCTTCTGATATTTCCACTACTTCTTCCTTCCCTCAGAATAGTGGACACTAATGACATGCAAAGTGGTGTTGTCACTTCCCTCTACTTACTTTGTTGCATCTTAAGGATAGTCAAGATCAAAGATTTGGCAAATACCATAGTCGCTGCCCTTTTTTACCCCTTAGAGACCTTTACAAAATTTTCAAGGGGTAAAGTCAATGGCTATACATCTGATCATGGTTTTACATCTGTAAGCCAAGAACCAGACGGTGTTAATAGTGCAAAGTGCAAAGCAGAAGGCTTGACAGTGGATGTGCCAAATTCTTCTAGTTCTTCAGGTTCATACCCTGAAAGTGTTCTCTTAGAAGATAATTGTAGCAGTTCAAATTTGGCATTAAGGGAGGTTTTGCTTGCATATGTTACTAAAGGGGATGATGTACAAGTTTTGGGTTCTTTGAGTGTGCTTGCCACTTTACTGCAAACTAAAGAACTTGATGAATCCATGTTAGATAAGCTTGGAATTCTTCCACAACGCAAACAGCACAAGAAACAGTTACTGCAAGCTTTGGTTGGCGAGGCTTCAGGTGAAGAGCAACTTTTTTCTTCTGAAAATAGCTTGATGAGGGATAGCATTGGCTGCGAGCTCAATATCTATCTTGAAAAGATTAAGGAGCTCTATGGGTTACCTTTTCTCTATTCTGATCTTGTAATAAGTCCTCGTGTGCCCAGATTTCAGGTGCTCGATGCATTAGTTAGCCTCTTTTGCCGTTCTAATATATCTTCAGAGACACTGTGGGATGGTGGTTGGCTTTTACGCCAGTTGCTTCCTTACAGTGAAGCAGAATTCAATAGTCATCACCTGGAATTGCTGCAAGTTTCATACAAGAATTCTGCTACTGCTCTTTTAAAGGAGGTTAGAGGTTTCTGGCCTGATCTTCTTATTACCGTTCTTTGCAATGAGTGGAAAAAATGCAAAAGAGCAATGGAGTCATCTTACCCTCCAAAAGAACCAAAGTGCGTACTTTTTCCTTCTCAAATGTTATCTTCAGAAGAAGATGTACCTGAGGGTTCGTCCTTTGCTGCTGGAGAAAGACTTCATGAATTGGCAAAGGTATTTGTAGTTCTGCACCAACTTCAAATATTCACTCTAGGTAGACCTTTGCCTGAGAAACCTCTTATTTATCCTCCTGGTGATCTTCCAGCGAATTCTCGTGCCCAGACTTCTGGACTTGATTTGTCAGGCCCTAAACCGGGAACTGAAGTCAGCCTTGTTAATGCTGTGCCTTGTAGAATTGCTTTCGAAAGGGGCAAAGAGCGCCATTTTTGCTTTCTGGCAATCTCTGTAGGAACGTCTGGGTGGCTTGTACTAGCAGAAGAGTTGCCACTAAAGAAGCCCTTTGGCATTGTTCGGGTTGCAGCACCTTTGGCTGGGTGCAATCCCAAGGTTGATGATAAACATCCAAGATGGTTACATCTGCGGATTCGACCATCTTCTCTACCTGTTCTGGATCCTGCCAAGTTCAATAACCACGGGAAATTAAAGACAAAAGCTTTTGTGGATGGAAGATGGACATTGGCGTTCAGGGATGAGGAGTCTTGCAAGTCTGCTTTAAGCATGATTGTTGAGGAAATTAATTTTCTGAGTGACGAGGTTCACAGAAGACTAAAACCTTTGATCAATCTCGAAACATCATTGGATTTATCAGGTCTTGCAGACGAGGATTCCTCCTCAAATACAACACCTCGCAATTCGGTATAA 2577 0.4055 MWFSFWRSRDRFSLDHLRYLTDQLTKVQTVNEVNKDFVIEALRSIAELITYGDQHDPSFFEFFMEKQVVGEFVRVLKLSRSISIPLQLLQTVSIMIQNLRSEHAIYYMFSNEHMNYLITYSFDFRNEELLSYYISFLRAISGKLNKNTISLLVKTRNDEVVSFPLYVEAIRFAFHEENMVRTAVRTVTLNVYHVGDECVNRYITSAPHTEYFSNLVSFFRNQCMDLNRLVSETLKNPGSDSTSAIIAAVDEIEDNLYYFSDVISAGIPDVGRLITDSILMLLIFPLLLPSLRIVDTNDMQSGVVTSLYLLCCILRIVKIKDLANTIVAALFYPLETFTKFSRGKVNGYTSDHGFTSVSQEPDGVNSAKCKAEGLTVDVPNSSSSSGSYPESVLLEDNCSSSNLALREVLLAYVTKGDDVQVLGSLSVLATLLQTKELDESMLDKLGILPQRKQHKKQLLQALVGEASGEEQLFSSENSLMRDSIGCELNIYLEKIKELYGLPFLYSDLVISPRVPRFQVLDALVSLFCRSNISSETLWDGGWLLRQLLPYSEAEFNSHHLELLQVSYKNSATALLKEVRGFWPDLLITVLCNEWKKCKRAMESSYPPKEPKCVLFPSQMLSSEEDVPEGSSFAAGERLHELAKVFVVLHQLQIFTLGRPLPEKPLIYPPGDLPANSRAQTSGLDLSGPKPGTEVSLVNAVPCRIAFERGKERHFCFLAISVGTSGWLVLAEELPLKKPFGIVRVAAPLAGCNPKVDDKHPRWLHLRIRPSSLPVLDPAKFNNHGKLKTKAFVDGRWTLAFRDEESCKSALSMIVEEINFLSDEVHRRLKPLINLETSLDLSGLADEDSSSNTTPRNSV* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00462 858 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
Lapu9g00462 858 PANTHER UNCHARACTERIZED 1 837 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00462 Lapu-Chr9 4992224 5006473 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00462 K19513 - gmx:100789779 1551.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00462 9 4992224 5006473 Lapu9g00462 9 4992224 5006473 ECH
Lapu3g00570 3 5816454 5825876 Lapu9g00462 9 4992224 5006473 PCT