Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00570 ATGGAAAAGCAAGTCATGGGTCAATTCGTACGTGTTCTGAAACTTACTAGGACTGTGAGCGTTCCACTTCAGTTGCTGCAAACAGTGAGCATTATGGTTCAGAACCTAAAAAGTGAACATGCTATATACTACATGTTCAGTAATGAATATATAAATTACCTGATAACTTATCCGTTTGACTTTCGAAATGAAGAGCTGCTGTCGTACTACATATCCTTTTTAAGAGCAATAAGTGGAAAATTGAACAAGAATACGGTTTCACTGCTTGTGAAGACTCACGGCGATGAAGTAGTTTCATTTCCACTGTATGTTGAGGCCATACGCTTTGCTTTTCATGAGGAGAGCATGGTTCGCACTGCTGTACGAGCCATAACCCTTAATGTCTATCATGTTGGAGATGACTCTGTCAATGGATATATAACCAGTACTCCTCACAAAGATTACTTCTCAAACCTGGCTTCATTTTTTAGGAAGCAGAGCATGGATTTAATTAAAGTGCTTTCTGATACACAGCTAAATCCGGGCCCAGATTCAATCTCTGCAATTATTGCTGCTGTAGATGAAATTGAGGATAATCTGTACTACTTCAGTGATGTTGTCTCTGCTGGAATTCCTGATGTTGGGAGGCTAATTACTGATGGCATTATAATGATTTTGATATTTCCATTACTTCTTCCTTCCCTAAGGGTCATGCCTGATAATGACATGCTAGATGGTATTGTCCCATCTCTGTACTTACTTTGTTGCATCCTGAGGATTGTCAAAATCAAAGATTTGGCAAATACTGTTGCTGCTGCTCTTTTTTATCCCTCGGAGGCCTTTAAAAAGAATTCTCGGGGTTTTCATTCAGATGGTGTTCTAATGCAAAATGGTTGTACTGGTTCAAATTTGTCTTTAAGGGAGGTTTTGCTTGCATATGTAACAAAAGGAAATGATATCCTAGTTTTGGGTTCTTTGAGTGTGCTTGCTACTCTGCTGCAAACTAAAGAACTTGATGAATCAATGCTAGATGGGCTTGGAATTCTTCCACAACGGAAACAACATAAAAAACTGTTACTGCAAGCTTTAGTTGGTGAGGGTTCAGGCGAAGAACAACTTTTTTCATCCAAAAGTAGCTTGAGTAGGGATGGTATTGGTAATGATATCAATGTCTATGATAAAAAGATCAAGGAGCAGTATGGAGTATCTTTTCTTCCTTCTGATGTGGGAACAAGCTCTCATGAACATAGATTTCAGGTGATTGATGCATTAGTGAGCCTCAGTTGTCGCTCTAATATATCTTCAGAGATACTGTGGGATGGTGGTTGGCTTTTGCGCCAGTTGCTTCCTTACAGTGTGTCAGAATTCAGTAGCCATCACCTTGAATTACTGAAAGTTTCTTACAAGAATTATGCTTCTTCTCTTGTAGAGGAGGTTAGAGGTATTTGGTCGGACTTACTTATTTCTGTTCTCTGTGACGAATGGAGAAAGTGCAAAAGAGCAATGGAGTCATCATCTCCTCGGAAAGAACCAAATTGCATACTTTTGCTACCTTGGAAGATTTCTTCAGAAGGTCATATTCCAGAGGGGTCATCTTTTGCTGCTGGAAAAAGAATGCATGAGTTGGTGAAGGTATTTGTACTACTACACCAGCTTCAAATATTCACTCTTGGAAGAGTTTTATCTGAGCAACCGCCGATTTACCCTCCTGGTGATCTTCCTGCAAATTGCCGTGCCCAAGGTTCTGGGCTTGATGTCTCAATCCCAAGGGCAGGAACTGAAGTAAGCCTTGACAATGCTGTGCCTTGTAGGATAGCTTTCGAGAGGGGAAAAGAGCTCCATGTTTACTTTCTAGCAATTTCTTTAGGAATATCTGGGTGGCTTGTTCTTGCAGAAGAATTGCCACTGAAGAAGTCTCATGGAGTGGTTCGGTCTGTTGCACCTTTGGCTGGGTGCAATCCCAGGATTGATGATAATCATGCAACGTGGTTACATTTGCGGATTCGGGCATCCTCTTTACCCTTTCTTGATCCCGTCCGATTCAAAGAGTATGGGAAAAAGAAAACAAAAGGTTCGGTAGATGGCAGATGGACATTGGCGTTCAGAGATGAGAAGACTTGCAAGTCTGCTTTTCTCATGATTGTTGAAGAAATAAATTTTCTTAGTAATGAGGTTCATAGAAGACTACAACCTTTGCTCAACCTTGAAACCGCAATAAATTTATCAGGTTCGTCTTTATGTGTTCCAGGGGATTCCTCTTCGTATAGAACACATCCCAATTAA 2262 0.405 MEKQVMGQFVRVLKLTRTVSVPLQLLQTVSIMVQNLKSEHAIYYMFSNEYINYLITYPFDFRNEELLSYYISFLRAISGKLNKNTVSLLVKTHGDEVVSFPLYVEAIRFAFHEESMVRTAVRAITLNVYHVGDDSVNGYITSTPHKDYFSNLASFFRKQSMDLIKVLSDTQLNPGPDSISAIIAAVDEIEDNLYYFSDVVSAGIPDVGRLITDGIIMILIFPLLLPSLRVMPDNDMLDGIVPSLYLLCCILRIVKIKDLANTVAAALFYPSEAFKKNSRGFHSDGVLMQNGCTGSNLSLREVLLAYVTKGNDILVLGSLSVLATLLQTKELDESMLDGLGILPQRKQHKKLLLQALVGEGSGEEQLFSSKSSLSRDGIGNDINVYDKKIKEQYGVSFLPSDVGTSSHEHRFQVIDALVSLSCRSNISSEILWDGGWLLRQLLPYSVSEFSSHHLELLKVSYKNYASSLVEEVRGIWSDLLISVLCDEWRKCKRAMESSSPRKEPNCILLLPWKISSEGHIPEGSSFAAGKRMHELVKVFVLLHQLQIFTLGRVLSEQPPIYPPGDLPANCRAQGSGLDVSIPRAGTEVSLDNAVPCRIAFERGKELHVYFLAISLGISGWLVLAEELPLKKSHGVVRSVAPLAGCNPRIDDNHATWLHLRIRASSLPFLDPVRFKEYGKKKTKGSVDGRWTLAFRDEKTCKSAFLMIVEEINFLSNEVHRRLQPLLNLETAINLSGSSLCVPGDSSSYRTHPN* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00570 753 Pfam Uncharacterised conserved protein 1 129 IPR019155 -
Lapu3g00570 753 PANTHER UNCHARACTERIZED 1 272 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00570 Lapu-Chr3 5816454 5825876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00570 K19513 - gmx:100786267 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00570 3 5816454 5825876 Lapu3g00570 3 5816454 5825876 ECH
Lapu3g00570 3 5816454 5825876 Lapu9g00462 9 4992224 5006473 PCT