Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00457 ATGAATATGTACCATTTGCAGCAGCTTCATAATCATCAACCTATGATGAAGATGGATTCTATGAGGAAGAGGGAGAGAAACAAGGGCATGGAGAAAGAGAGGCTTCAAGTCATGGACTTGAGTGGCATGGCTTTGGACTCTCTTCCCAAACCTTCTCTTGATTTAGCCACCATTTGCAAGTTGGACTTATCTAATAACAATCTCCAGGACATTCCTGAATCCTTAACAGCTAGACTACTAAACATGGAGGAGTTGGACGTTCGTTCCAACCAGCTTAAGTCTCTTCCAAATTCCATTGGTTGTCTCTCTAAGCTTAAGGTTTTAAATGTCTCAGGAAACTTCATCGAATTCCTCCCTAAAACCATTGAGAATTGCAGAGCATTAGAAGAACTGAATGCCAATTTCAACAAGCTCAGCAAGTTACCAGACACAATAGGGTTTGAGCTGATAAACCTGAAGAAGCTCTCAGTGAACTCCAACAAGCTGGTTTTTCTTCCTAGCTCCACCTCACACCTAACATCTCTGAAGGTTCTCGATGCACGCTTGAATTGCCTAAGGGCGCTTCCGGAGGACCTTGAGAATCTCGTAAACCTTGAGACACTGAATGTGAGCCAGAACTTCCAGTACTTGGAAACCCTCCCTTACTCTATAGGGCTCCTCCTGTCCCTGGTTGAACTTGACGTTAGCTACAACAAGATCAAGACCTTGCCTGAATCCATTGGGTGCCTCAAGAACCTCAAGAAGCTAAGTGTTGAAGGGAACCCTCTGGTTTGTCCCCCAATGGAGGTGGTGGAGCAGGGACTGCACGTGGTGATGGAGTACATGCACCATAAGATCAACTCAAGTGATCAACGCCCAACAAAGAAAAGGTGGTGGATGATAAAGATGGTGAAGTGTGGAACCTTTAATAAACAAGTGAGAAGTGGGAAACGACCAGAACATGAGGGTTACAATATGCTTAAGCACCAGAATATCAACGGTCTTGCTTCGCCAGGCTTCATGGGGATGCTTTCACCTCTTCGCTTGTTCTCATCACCTCGCCATTCCTTCGGTTGA 1056 0.4517 MNMYHLQQLHNHQPMMKMDSMRKRERNKGMEKERLQVMDLSGMALDSLPKPSLDLATICKLDLSNNNLQDIPESLTARLLNMEELDVRSNQLKSLPNSIGCLSKLKVLNVSGNFIEFLPKTIENCRALEELNANFNKLSKLPDTIGFELINLKKLSVNSNKLVFLPSSTSHLTSLKVLDARLNCLRALPEDLENLVNLETLNVSQNFQYLETLPYSIGLLLSLVELDVSYNKIKTLPESIGCLKNLKKLSVEGNPLVCPPMEVVEQGLHVVMEYMHHKINSSDQRPTKKRWWMIKMVKCGTFNKQVRSGKRPEHEGYNMLKHQNINGLASPGFMGMLSPLRLFSSPRHSFG* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00457 351 PANTHER - 149 271 - -
Lapu9g00457 351 SMART LRR_typ_2 126 148 IPR003591 -
Lapu9g00457 351 SMART LRR_typ_2 55 78 IPR003591 -
Lapu9g00457 351 SMART LRR_typ_2 149 171 IPR003591 -
Lapu9g00457 351 SMART LRR_typ_2 220 243 IPR003591 -
Lapu9g00457 351 SMART LRR_typ_2 79 101 IPR003591 -
Lapu9g00457 351 SMART LRR_typ_2 172 195 IPR003591 -
Lapu9g00457 351 SMART LRR_typ_2 102 125 IPR003591 -
Lapu9g00457 351 ProSiteProfiles Leucine-rich repeat profile. 57 78 IPR001611 GO:0005515
Lapu9g00457 351 Gene3D Ribonuclease Inhibitor 148 277 IPR032675 -
Lapu9g00457 351 Gene3D Ribonuclease Inhibitor 2 146 IPR032675 -
Lapu9g00457 351 SMART LRR_bac_2 220 239 - -
Lapu9g00457 351 SMART LRR_bac_2 125 144 - -
Lapu9g00457 351 SMART LRR_bac_2 172 191 - -
Lapu9g00457 351 SMART LRR_bac_2 195 216 - -
Lapu9g00457 351 SMART LRR_bac_2 102 121 - -
Lapu9g00457 351 SMART LRR_bac_2 55 74 - -
Lapu9g00457 351 SMART LRR_bac_2 79 98 - -
Lapu9g00457 351 SMART LRR_bac_2 149 168 - -
Lapu9g00457 351 ProSiteProfiles Leucine-rich repeat profile. 222 243 IPR001611 GO:0005515
Lapu9g00457 351 Pfam Leucine rich repeat 151 206 IPR001611 GO:0005515
Lapu9g00457 351 Pfam Leucine rich repeat 60 113 IPR001611 GO:0005515
Lapu9g00457 351 SUPERFAMILY L domain-like 35 260 - -
Lapu9g00457 351 ProSiteProfiles Leucine-rich repeat profile. 81 102 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00457 Lapu-Chr9 4917957 4921365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00457 34 283 Receptor kinase-like Gene Family AT5G46330 27.099 3.58e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00457 - - gmx:100775711 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00457 9 4917957 4921365 Lapu9g00457 9 4917957 4921365 ECH
Lapu3g00562 3 5707068 5710690 Lapu9g00457 9 4917957 4921365 PCT