Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00431 ATGTCCAACAACAACGAAAACATCTCCATGGCAGATCTCTCTTCTGCCCTCAGCGGGGATAATCGCGCCGATCTAGTCAGTGCTCTCAAGAGTAAGATACAGAGTCTGGCTGGACAGCATTCTGATATTCTGGAGAGTTTATCGCCTAACGTCAGGAAGCGTGTTGAATCTCTTAGAGAGATTCAGGGTAAACATGATGAACTAGAGGCAGACTTCTTCAAGGAGAGAGAAGCTCTTGAAGCAAAGTACCAAAAGTTGTATCAGCCGTTGTACGTAAAGCGCTATGAAATAGTGAATGGTGTTACTGAAGTGGAAGGGGCAGCAAATGAAACAGCCGATGAATCAGAGGAGGATAATGAGAAAGGAGTTCCTTCTTTTTGGCTCAATGCAATGAAAAATAATGATGTGTTGGCTGAAGAGATTTCAGAGCGTGATGAAGGTGCTCTCAAGTTTCTTAAAGACATCAAGTGGAGCCGGATAGAAAACCCTAAAGGATTCAAGCTTGAGTTCTTCTTTGATACCAATCCTTACTTTTCAAACTCTGTCTTGACTAAAATATATCATATGATTGATGAGGATGAACCTATATTGGAGAAAGCAATTGGGACGGAAATTGAATGGTATCCGGGAAAATGCTTGACTCAGAAGGTGTTGAAGAGAAAGCCCAAGAAGGGTGCTAAAAATGCTAAACCAATTACCAAAACTGAAAGCTGTGAAAGCTTTTTCAATTTTTTCAAACCACCAGAAGTTCCTGAAGATGATGATGACATTGATGAAGAATTGGCTGAGGAACTTCAGAATCAGATGGAACAAGATTATGACATTGGGTCAACCATAAGGGACAAAATTATCCCTCATGCTGTATCATGGTTTACCGGGGAGGCTGTTCAGGGAGATGAGTTTGAAGACTTGGAGGATGATGAGGACGAAGATGATGATGAGGAGGATGAAGAGGAGGATGAAGACGAAGATGACGATGATGATGAAGAGGAGGAAGACAATAAGACTAAAAAGAAGAAGAGTGGAAGGGCGCAGATTGGTGATGGTCAGCAGGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAG 1086 0.4263 MSNNNENISMADLSSALSGDNRADLVSALKSKIQSLAGQHSDILESLSPNVRKRVESLREIQGKHDELEADFFKEREALEAKYQKLYQPLYVKRYEIVNGVTEVEGAANETADESEEDNEKGVPSFWLNAMKNNDVLAEEISERDEGALKFLKDIKWSRIENPKGFKLEFFFDTNPYFSNSVLTKIYHMIDEDEPILEKAIGTEIEWYPGKCLTQKVLKRKPKKGAKNAKPITKTESCESFFNFFKPPEVPEDDDDIDEELAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAVQGDEFEDLEDDEDEDDDEEDEEEDEDEDDDDDEEEEDNKTKKKKSGRAQIGDGQQGERPPECKQQ* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00431 361 Gene3D Nucleosome assembly protein 118 294 - -
Lapu9g00431 361 MobiDBLite consensus disorder prediction 298 331 - -
Lapu9g00431 361 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 33 316 IPR002164 GO:0005634|GO:0006334
Lapu9g00431 361 Coils Coil 301 321 - -
Lapu9g00431 361 FunFam Nucleosome assembly protein11 118 294 - -
Lapu9g00431 361 FunFam Nucleosome assembly protein 1-like 1 45 103 - -
Lapu9g00431 361 Gene3D - 45 104 - -
Lapu9g00431 361 MobiDBLite consensus disorder prediction 293 361 - -
Lapu9g00431 361 Pfam Nucleosome assembly protein (NAP) 53 294 IPR002164 GO:0005634|GO:0006334
Lapu9g00431 361 SUPERFAMILY NAP-like 30 293 IPR037231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00431 Lapu-Chr9 4569368 4572692 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00431 K11279 - gmx:100783783 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00431 9 4569368 4572692 Lapu9g00431 9 4569368 4572692 ECH
Lapu3g00527 3 5385383 5388992 Lapu9g00431 9 4569368 4572692 PCT