Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00527 ATGAGTAACGACAAGGACACCTTCAACGTCGCCGATCTCTCCTCTGTTCTCAACGAGGAGAATAGAGCAGACCTTGTCAATGCTCTTAAGAGCAAGATACAGAGTTTGGCTGGGCAGCACTCCGATATTCTCGAGTCGCTGTCTCCTAATGTCAGGAAGCGTGTTGAGGTTCTTAGAGAGATCCAGGGTCAACACGATGAATTAGAGGCTAAATTTTTTGAGGAGAGAGCAGCTCTCGAGGCCAAATACCAAAAATTGTATCAACCTCTATACTCAAAGCGGTACGACATAGTAAATGGTGTTAACGAAGTTGAAGAAGCGGCTGTGAATGAAACAACACCCGATAGTGGGGAGGATGAAGAGAAAGGAGTGCCTGCGTTTTGGCTTACTGCAATGAAAAATAATGAAGTCTTAGCCGAGGAGATTTCAGAACGTGATGAAGGTGCTCTCAAGTTCCTCAAAGATATCAAGTGGAGCAGGATAGAAAATCCTAAAGGATTCAAGCTTGAGTTTTTCTTTGATACCAATCCTTATTTTACCAATACTGTCTTGACTAAAACATATCATATGATTGATGAGGATGAACCAATATTGGAGAAAGCAATTGGGACTGAAATTCAATGGCACCCAGGAAAATGCCTGACACAGAAGATTCTTAAGAAAAAGCCCAAGAAGGGTTCAAAGAATGCTAAACCAATCACCAAGACTGAAAGTTGTGAAAGCTTCTTCAATTTCTTCAATCCACCACAAGTTCCTGAAGATGATGAAGACATTGATGAAGATGCGGCTGAGGAGCTGCAGAATCAGATGGAACAAGACTATGATATTGGGTCAACAATAAGAGACAAGATTATTCCCCATGCCGTGTCATGGTTTACTGGAGAAGCCATTCAGGGGGATGAGTTTGGAGAACTGGAGGAGGATGAGGATGATGAAGATATCGACGAAGATGATGACGAAGAGGAGGAAGAAGATGATGACGATGATGACGATGACGAAGATGATGAAGAAAGCAAGACTAAGAAGAAGTCATCAGCCCCCAAGAAGAGTGGAAGGGCACAGCTTGGCGATGGTCAGCAGGGTGAGCGACCTCCAGAATGCAAGCAGCAGTAG 1113 0.4367 MSNDKDTFNVADLSSVLNEENRADLVNALKSKIQSLAGQHSDILESLSPNVRKRVEVLREIQGQHDELEAKFFEERAALEAKYQKLYQPLYSKRYDIVNGVNEVEEAAVNETTPDSGEDEEKGVPAFWLTAMKNNEVLAEEISERDEGALKFLKDIKWSRIENPKGFKLEFFFDTNPYFTNTVLTKTYHMIDEDEPILEKAIGTEIQWHPGKCLTQKILKKKPKKGSKNAKPITKTESCESFFNFFNPPQVPEDDEDIDEDAAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGDEFGELEEDEDDEDIDEDDDEEEEEDDDDDDDDEDDEESKTKKKSSAPKKSGRAQLGDGQQGERPPECKQQ* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00527 370 FunFam Nucleosome assembly protein 1-like 1 45 103 - -
Lapu3g00527 370 Gene3D Nucleosome assembly protein 119 295 - -
Lapu3g00527 370 Gene3D - 45 104 - -
Lapu3g00527 370 MobiDBLite consensus disorder prediction 295 370 - -
Lapu3g00527 370 MobiDBLite consensus disorder prediction 300 335 - -
Lapu3g00527 370 SUPERFAMILY NAP-like 30 294 IPR037231 -
Lapu3g00527 370 Pfam Nucleosome assembly protein (NAP) 53 295 IPR002164 GO:0005634|GO:0006334
Lapu3g00527 370 FunFam Nucleosome assembly protein11 119 295 - -
Lapu3g00527 370 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 33 325 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00527 Lapu-Chr3 5385383 5388992 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00527 K11279 - gmx:100785314 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00527 3 5385383 5388992 Lapu3g00527 3 5385383 5388992 ECH
Lapu3g00527 3 5385383 5388992 Lapu9g00431 9 4569368 4572692 PCT