Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00398 ATGATGCAAACACGTTCATTGTTGTTTTCCCTAACTTTCTCTCCGTTCAAACTCCGTTCTCCTCCCGTCAGATCCAAACCCCGTTTCTCAACCACCAGAATGTCCTCAAGCCAAAGTGTAGTGGAGCACGTTGTCCTTGTCAAGGTCAAAGACGAAACGGAACCGACCAAGGTCGACGCCATGGTCAAGGCCATGAACTCGCTAACCTCCCTCGACGGGGTCCTGCACCTCACGGCGGGCCCAATCCTCCGTAACGGACCCACCTCATCTTTCACTCACATGCTCCACAGCCGCTACCACTCCAAGCACGATCTCCAGGCCTACAACGCGCACCCCACCCACGTCGCCGTTGCCAGGGGCTTTGTTTTCCCCGTCTCTGACGACATCATGATCGTGGACTGGGTCGCCGGAAAAACGAACCTTAAGCCGCCGGCGACGGGATCGAGCCTCCGCGTGAGATTTTTGAAACTGAAAGGGGACGGTGGTGACGACCACGACGAGGTTAAGGAGGAGGTTTTGAGAGTGGTAGGAGGAACGGAAGAGGGTGTTGGAGAATTGTCTTACGGCGTGAACTTCTCGCCGGAGAGGGCAAAGGGCTTCTCGATCGCTTCGCTGGCGGTTTTTCCCGGACGGAAGGAGGTGGAGAGTGTGGATATGCAGGAAGGGTTGGTGAAGGTGGTGGAGCATGTGGAGGATGTGGTGGTTGTTGACTATGTGGTGCCTTAG 726 0.5592 MMQTRSLLFSLTFSPFKLRSPPVRSKPRFSTTRMSSSQSVVEHVVLVKVKDETEPTKVDAMVKAMNSLTSLDGVLHLTAGPILRNGPTSSFTHMLHSRYHSKHDLQAYNAHPTHVAVARGFVFPVSDDIMIVDWVAGKTNLKPPATGSSLRVRFLKLKGDGGDDHDEVKEEVLRVVGGTEEGVGELSYGVNFSPERAKGFSIASLAVFPGRKEVESVDMQEGLVKVVEHVEDVVVVDYVVP* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00398 241 SUPERFAMILY Dimeric alpha+beta barrel 40 139 IPR011008 -
Lapu9g00398 241 Gene3D - 32 138 - -
Lapu9g00398 241 SMART Dabb_2 41 136 IPR013097 -
Lapu9g00398 241 SMART Dabb_2 149 240 IPR013097 -
Lapu9g00398 241 Pfam Stress responsive A/B Barrel Domain 41 135 IPR013097 -
Lapu9g00398 241 SUPERFAMILY Dimeric alpha+beta barrel 154 240 IPR011008 -
Lapu9g00398 241 PANTHER - 38 240 IPR044662 -
Lapu9g00398 241 ProSiteProfiles Stress-response A/B barrel domain profile. 149 241 IPR013097 -
Lapu9g00398 241 ProSiteProfiles Stress-response A/B barrel domain profile. 41 134 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00398 Lapu-Chr9 4239720 4240798 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00398 - - var:108330950 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00398 9 4239720 4240798 Lapu9g00398 9 4239720 4240798 ECH
Lapu3g00496 3 5087157 5087924 Lapu9g00398 9 4239720 4240798 PCT