Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00389 ATGGTTCAAACCAAAACCACTCGTAAACCCTCTAAACCCGACGCCATCCATCCACTCACTCCCGCCCAAACCCGCGAACCTTCCTCCCTCTCCGCCTCTCCCCCTCTCCGCCGCCGCAGCCTCCGCCTCGCCTCCCTCTCCGACGCCTCCCCCTCCGCCTTCCTCAACTTAAGATCGGGAAAGAGAGTTCTCAAGAGAGCGATGTCAAACGACGCTGAAGAACAAGGTAATAACGCAAGCGACGATGCTGATGACGTTGCAGTAGCGGTTGATGTCAATGTTATAGCACGAGAATCTACAACGCTAAACTCAGCCTCAGCCTCAGCCTCATCCGTCAATGTCAATATTATGGTAGATGATTCCGGTGTTGGGGTTTCCGGCGGGAACCGGAAGCGTAAGAGTGACTCGACCGGTTCCGAACACGAGGAGTTTCTCAACTTAAGATCGGGAAAGAAGGCTCTCAAGAGAACATTAACTAACGATTCCGAAGAACAAGTTAATAACGCAAATGATGACGACGACGACGACGACGACGTGGCAGTGGTGGTTGATGGCGTCGTGACAACGCCGGAATCCAGAACGGTAAACTCGAGTTTGAATAATGCAAGAGAGGTTCGACAACGTTCTAGAAACTCCAATGCAAGAGAGCGCCGTTCCGGTTTGAGGAGGAACGATTATATGGAGCGGTTCCACGACATTGCGCGGGAAAACGCGTCTAGGTTTGCTTTCTTCACACCAGAAGAGGAAGACAGTGACCGGTCGCCGCCGGTTCCCGAAGCGGCGCATGAGGAAATTGAGGACTGGCCCGGTCCTTTCTCCACAGCTATGAAAATCATCAGAGACCGTGGGACGAATCTGCAAAACGCTCTAAAGAGTTCGCAGACGAACTTGTGTGAGTCTATTAAGTGGGTTCCCAAGGCCAAGAAAGGAGATGTAGGTGTTTCTTCGGTTCCTTCGTTGCAAGATATGTGCCTTAAGATTCTTGTGAAGAATGTTGACGCGATTGCATCGCTCGATAGTGTGCCTGATGCGCTGAGACACCGGCTAAGCCAGTTGCTGTGTGACTCTAGGAGAATTAACGGACACTTTCTGGAGCTTCTTGTGCGTGGAACTCCCACGGAGATTCGGTTAAGAGATTGCTCGTGGTTGACTGAGGAACAGTTTACTGAGTGTTTTCGAATGTGCGACACGGAGAATTTGGTGGTACTGCAACTTGACCAGTGTGGGCGATGTTTGCCTGATTTTGTAATAGTTGCTACTTTGGCACAGTCACCAAGGAATTTGGTTAGATTAACTACTCTATCACTCCGTGGTGCATGCAGACTTTCAGATGGAGGTTTGCGTGCACTTGTTTCTTCAGCTCCTGCACTTAGATCGATAAATCTCAGCCAGTGCTCCCTTCTCACATCTGCTAGTATATATATTTTGGCTGAATCATTAAGATATCTTCTGAAAGAGTTGTTCCTTGATGATTGTCAAGGCATTGATGCTGCACTAGTTGTGCCAGCACTGATTGAGCTTGAACATTTAGAAGTGTTGTCGGTAGCTGGTATTGAAACTGTTTGTGATGAATTTGTCAAGGATTACATTGTTGCACGTGGCCAAAACATGAAAGAGCTCGTTTTGAAGGACTGTATAAACTTGACTGATGCATCAATCAAAGCTATTGTTGAGTTCTGTCCAGGATTACGGGTGCTTGATCTTATGAACCTGAACAGATTAACAGATTCATCTGTGGGATATCTTACCAATGGTTGCCATGCACTTCATACCCTGAAGCTTTGCCGAAATCCATTCAGTGATGAAGCAATTGCTGCATTTGTGGAGACCACTGGAGGGTCCCTAAAGGAACTGTCACTTAATAACATTAAGAAGGTGGGTTACCACACAACCTTGTCACTTGCAAACCATGCGAAAAACTTGCATTCTCTGGATTTATCTTGGTGCAGAAATTTGACGGACAATGCCCTAGGTTTGATTGTGGACAGCTGCTTGGCGCTGAGGTTACTCAAACTTTTTGGATGCACTCAGGTAACAGATGCATTTCTTAATGGTCACTCAAACCTACAAATACAGATAATTGGTTTGAAGATGTCTCCTGTTTTACAACATGTCAAAGTTCCAGATCCTCATCAGGGTGCTTTGAATTATTCATCTGTCTCTTCAGATTTGGCATAA 2178 0.4697 MVQTKTTRKPSKPDAIHPLTPAQTREPSSLSASPPLRRRSLRLASLSDASPSAFLNLRSGKRVLKRAMSNDAEEQGNNASDDADDVAVAVDVNVIARESTTLNSASASASSVNVNIMVDDSGVGVSGGNRKRKSDSTGSEHEEFLNLRSGKKALKRTLTNDSEEQVNNANDDDDDDDDVAVVVDGVVTTPESRTVNSSLNNAREVRQRSRNSNARERRSGLRRNDYMERFHDIARENASRFAFFTPEEEDSDRSPPVPEAAHEEIEDWPGPFSTAMKIIRDRGTNLQNALKSSQTNLCESIKWVPKAKKGDVGVSSVPSLQDMCLKILVKNVDAIASLDSVPDALRHRLSQLLCDSRRINGHFLELLVRGTPTEIRLRDCSWLTEEQFTECFRMCDTENLVVLQLDQCGRCLPDFVIVATLAQSPRNLVRLTTLSLRGACRLSDGGLRALVSSAPALRSINLSQCSLLTSASIYILAESLRYLLKELFLDDCQGIDAALVVPALIELEHLEVLSVAGIETVCDEFVKDYIVARGQNMKELVLKDCINLTDASIKAIVEFCPGLRVLDLMNLNRLTDSSVGYLTNGCHALHTLKLCRNPFSDEAIAAFVETTGGSLKELSLNNIKKVGYHTTLSLANHAKNLHSLDLSWCRNLTDNALGLIVDSCLALRLLKLFGCTQVTDAFLNGHSNLQIQIIGLKMSPVLQHVKVPDPHQGALNYSSVSSDLA* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00389 725 MobiDBLite consensus disorder prediction 208 223 - -
Lapu9g00389 725 MobiDBLite consensus disorder prediction 119 146 - -
Lapu9g00389 725 MobiDBLite consensus disorder prediction 1 37 - -
Lapu9g00389 725 PANTHER UNCHARACTERIZED 327 688 - -
Lapu9g00389 725 MobiDBLite consensus disorder prediction 189 207 - -
Lapu9g00389 725 FunFam RNI-like superfamily protein 311 528 - -
Lapu9g00389 725 SUPERFAMILY RNI-like 376 682 - -
Lapu9g00389 725 Gene3D Ribonuclease Inhibitor 529 607 IPR032675 -
Lapu9g00389 725 MobiDBLite consensus disorder prediction 166 181 - -
Lapu9g00389 725 Gene3D Ribonuclease Inhibitor 612 707 IPR032675 -
Lapu9g00389 725 MobiDBLite consensus disorder prediction 158 223 - -
Lapu9g00389 725 Gene3D Ribonuclease Inhibitor 284 528 IPR032675 -
Lapu9g00389 725 FunFam F-box/LRR protein 533 710 - -
Lapu9g00389 725 SMART LRR_CC_2 534 559 IPR006553 -
Lapu9g00389 725 SMART LRR_CC_2 428 453 IPR006553 -
Lapu9g00389 725 SMART LRR_CC_2 560 585 IPR006553 -
Lapu9g00389 725 SMART LRR_CC_2 454 479 IPR006553 -
Lapu9g00389 725 SMART LRR_CC_2 638 663 IPR006553 -
Lapu9g00389 725 SMART LRR_CC_2 586 610 IPR006553 -
Lapu9g00389 725 SMART LRR_CC_2 664 689 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00389 Lapu-Chr9 4130841 4136278 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00389 K15082 - gmx:100808150 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00389 9 4130841 4136278 Lapu9g00389 9 4130841 4136278 ECH
Lapu3g00486 3 4988730 4992929 Lapu9g00389 9 4130841 4136278 PCT