Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00355 ATGGCAAATCATCCTTTGACCCACTCTCACTCTTTCCGCGAGAGGTTTGATGAAACTCTCTCTGGTCACAGGAATGAAATTTTGGCCCTTCTTTCAAGGCTTGAAGCCAAGGGCAAGGGAATCCTGCAACACCACCAGGTCATTGCAGAGTTTGAGGAAATTCCTGAGGAGAACAGGAAGAAGCTGCAAGATGGGGCCTTTGGAGAAGTTTTGAGATCTACACAGGAAGCCATAGTGCTGCCACCTTTTGTTGCTCTGGCTGTTAGACCAAGGCCTGGTGTTTGGGAGTATCTGCGCGTGAATGTGCACATGCTTGTTGTTGATGAGCTAAGTCCTGCTGAGTATCTGCGTTTCAAGGAGGAGCTTGTTGAGGGAAGTTCTAACGGCAACTTTGTGCTTGAGTTGGACTTTGAACCATTTAATGCGTCTTTCCCTCGCCCAACTCTGAACAAGTCCATTGGGAATGGCGTGGAGTTCCTCAACCGCCATCTTTCGGCCAAACTCTTTCATGACAAGGAGAGCATGCAGCCACTGCTTGAATTCCTCAGGCTTCACAGTTATAAGGGCAAGACTATGATGTTGAATGACAAAGTTCAGAACCTGAATTCTCTCCAACATGTTTTGAGAAAAGCAGAAGAGTATCTAACTTCGGTTGCTCCTGAAACCCCCTACTCAGAATTTGAAAACAGATTCCGGGAGATTGGTTTGGAGAGAGGATGGGGTGACATCGCTGAGCGTGTCCTCGAGATGATCCAGCTTCTCTTGGATCTTCTGGAGGCACCTGACCCTTGCACCCTTGAGACATTCCTTGGAAGAGTCCCTATGGTCTTCAATGTTGTTATCCTTTCTCCCCATGGTTACTTTGCCCAAGATAATGTCTTGGGATACCCTGACACTGGTGGACAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAATGAGATGCTCAACCGCATCAAGAAACAAGGCTTGGATATCACTCCTCGTATTCTCATTATCACTCGTCTTCTCCCTGATGCAGTAGGAACTACATGTGGCCAACGTCTAGAGAGGGTATATGATACTGAATATTGTGACATTCTCCGAGTTCCTTTCAGAACAGAGAAGGGAATTGTTCGCAAATGGATCTCAAGATTCGAAGTCTGGCCATACCTAGAGACTTACGCCGAGGATGTTGCTATTGAACTTTCTAAGGAGTTGCAAGCCAAGCCAGATCTGATTGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCTTTGTTAGCACATAAATTAGGAGTAACTCAGTGTACCATTGCTCATGCTCTAGAAAAGACCAAGTACCCTGAGTCTGACATTTACTGGAAAAAATTTGAAGAGAAATATCACTTTTCATGCCAATTTACTGCTGATCTTTTTGCAATGAACCACACAGACTTTATCATCACTAGCACCTTCCAAGAGATTGCTGGAAGCAAGGATACTGTTGGACAGTACGAGAGTCACACTGCCTTCACCCTTCCTGGACTTTACCGAGTTGTTCATGGTATTGATGTCTTTGATCCAAAGTTCAACATTGTCTCTCCAGGAGCTGATATGGGCATATACTTCCCATACACTGAAACTGAGCGTAGGTTAACAAACTTCCACCCTGAGATTGAAGAGCTTCTTTACAGCTCAGTGGAGAATGAGGAACACATATGTGTATTGAAGGACCGCAACAAGCCAATCATCTTCACCATGGCAAGACTTGACCGTGTGAAGAACATCACAGGACTTGTTGAGTGGTACGGCAAGAATGCACGCCTCCGCGAGTTGGTGAACCTTGTTGTTGTTGCTGGAGACAGGAGGAAGGAGTCCAAGGACTTGGAAGAGAAGGCTGAGATGAAGAAGATGTACGGCCTCATTGAGACCTACAAGTTGAATGGCCAATTCAGATGGATCTCTTCTCAGATGAACAGAGTGAGAAATGGAGAGCTCTACCGAGTCATTTGTGACACAAAGGGTGCCTTTGTGCAGCCTGCAGTTTATGAAGCTTTTGGGTTGACTGTGGTTGAAGCCATGACTTGTGGATTGCCAACATTTGCCACATTCAATGGTGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGATACCATATTGACCCCTATCATGGTGACCGTGCTGCTGAGATCCTTGTTGACTTCTTTGAGAAGAGCACTGCTGACCCATCTCACTGGGAGAAAATCTCCCAGGGAGGACTCAAGCGTATTCAAGAGAAGTACACATGGCAGATTTACTCTGACAGGCTCTTGACACTCACGGGTGTCTATGGCTTCTGGAAGCATGTCACCAACCTTGAACGCCGTGAGAGCAAACGTTACCTTGAGATGTTCTATGCTCTCAAATACCGCAAATTGAATGCATTATTTCATTATTGTGATCTCAGGCCGAGTCCGTACCCCTTGCCATTGAGGAGTAAAATCACTGTTGAAGAGAAAATCGATGGAGAAACCGGCTTTTTGTCTTATGGAGCTTTCATAAATAACGCCATTGATTCTGATTGTGATCAGCTTTTGGATTTAAGGAGTCTAAAATGA 2568 0.4544 MANHPLTHSHSFRERFDETLSGHRNEILALLSRLEAKGKGILQHHQVIAEFEEIPEENRKKLQDGAFGEVLRSTQEAIVLPPFVALAVRPRPGVWEYLRVNVHMLVVDELSPAEYLRFKEELVEGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHDKESMQPLLEFLRLHSYKGKTMMLNDKVQNLNSLQHVLRKAEEYLTSVAPETPYSEFENRFREIGLERGWGDIAERVLEMIQLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLNRIKKQGLDITPRILIITRLLPDAVGTTCGQRLERVYDTEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYAEDVAIELSKELQAKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMGIYFPYTETERRLTNFHPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATFNGGPAEIIVHGKSGYHIDPYHGDRAAEILVDFFEKSTADPSHWEKISQGGLKRIQEKYTWQIYSDRLLTLTGVYGFWKHVTNLERRESKRYLEMFYALKYRKLNALFHYCDLRPSPYPLPLRSKITVEEKIDGETGFLSYGAFINNAIDSDCDQLLDLRSLK* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00355 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Lapu9g00355 855 Gene3D - 25 145 - -
Lapu9g00355 855 Pfam Glycosyl transferases group 1 564 739 IPR001296 GO:0016757
Lapu9g00355 855 FunFam Sucrose synthase 280 542 - -
Lapu9g00355 855 Pfam Sucrose synthase 9 553 IPR000368 GO:0005985|GO:0016157
Lapu9g00355 855 PANTHER - 8 797 IPR012820 GO:0005985|GO:0016157
Lapu9g00355 855 Gene3D Glycogen Phosphorylase B; 280 796 - -
Lapu9g00355 855 NCBIfam sucrose synthase 24 797 IPR012820 GO:0005985|GO:0016157
Lapu9g00355 855 Gene3D - 146 275 - -
Lapu9g00355 855 Gene3D Glycogen Phosphorylase B; 527 753 - -
Lapu9g00355 855 FunFam Sucrose synthase 11 145 - -
Lapu9g00355 855 FunFam Sucrose synthase 146 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00355 Lapu-Chr9 3706428 3712902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00355 2 796 Glycosyltransferase AT3G43190 84.025 0.0 1409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00355 K00695 - gmx:100819730 1556.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00355 9 3706428 3712902 Lapu9g00355 9 3706428 3712902 ECH
Lapu3g00445 3 4541723 4548570 Lapu9g00355 9 3706428 3712902 PCT