Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00445 ATGGCCGCCGCCGATCGTTTGACCCGTGTTCACAGTCTCCGTGAGAGGCTTGATGAAACCCTGTCTTCCAACAGGAACGAAATTTTGGCCCTTTTGTCAAGGATCGAAGCCAAGGGCAAGGGGATCTTGCAACACCATCAGGTCATTGCTGAGTTTGAGGAAATCCCCGAGGAGAGCAGACAGAAGCTCACTGATGGTGCCTTCGGAGAAGTTTTGAGATCTACTCAGGAAGCCATAGTTTTGCCACCATGGGTTGCTCTGGCTGTTCGTCCAAGGCCTGGTGTGTGGGAGTACCTGAGAGTGAATGTGCACGCCCTTGTTGTTGAGGTGTTGCAACCTGCTGAGTACCTGCGCTTCAAGGAGGAGCTTGTTGATGGAAGTTCTAATGGCAACTTTGTACTTGAGCTGGACTTTGAACCCTTTACCGCATCTTTCCCCCGCCCAACTCTTAACAAGTCAATTGGAAATGGTGTGCAATTCCTCAACCGCCACCTTTCTGCAAAACTCTTCCATGACAAGGAGAGCTTGCACCCACTTTTGGAATTCCTCAGGCTTCACAGCGTCAAGGGAAAGACTTTGATGTTGAATGACAGAATTCAAAACCCGGATGCTCTTCAACATGTTCTGAGGAAAGCTGAGGAGTATCTGGGCACAGTGCCTCCTGAAACCCCCTACTCAGCATTTGAGCACAAGTTCCAGGAGATTGGTTTGGAGAGAGGGTGGGGTGACAACGCAGAGCGTGTACTTGAGTCAATTCAACTTCTGTTGGATCTTCTTGAGGCCCCTGATCCGTGCACTCTTGAGACTTTCCTTGGAAGAATCCCTATGGTGTTTAATGTTGTTATTCTTTCTCCCCATGGTTACTTTGCCCAAGATAATGTCTTGGGATACCCTGACACTGGTGGTCAGGTTGTTTACATCTTGGATCAAGTTCGCGCTTTGGAGAATGAGATGCTCCATCGCATTAAACAACAAGGATTGGACATTGTTCCTCGTATTCTCATTATCACCCGTCTTCTCCCAGATGCAGTAGGTACTACTTGTGGCCAACGTCTTGAGAAGGTGTTTGGAACCGAGCACTCCCACATTCTTCGAGTTCCCTTTAGAACTGAGAAGGGAATTGTTCGCAAGTGGATCTCAAGATTCGAAGTGTGGCCCTACTTGGAAACTTACACCGAGGATGTTGCTCACGAGCTTGCCAAAGAGTTGCAAGGCAAGCCAGATCTGATCGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCTTTGTTGGCACATAAATTAGGTGTCACTCAGTGTACCATTGCTCATGCACTCGAGAAGACCAAATACCCTGAATCCGACATTTACTGGAAAAAATTGGAAGAGAGATACCACTTCTCTTGCCAATTCACAGCTGATCTATTTGCCATGAACCACACAGATTTCATTATCACCAGTACATTCCAAGAGATTGCTGGAAGCAAGGACACTGTCGGACAGTATGAGTCTCACACAGCCTTCACCCTTCCTGGACTCTACCGTGTTGTGCATGGTATTGATGTCTTCGATCCAAAATTCAACATTGTCTCTCCCGGAGCTGATCAAACCATTTACTTCCCCCACACCGAAACTAGCCGTAGGTTGACCTCCTTCCACCCCGAAATCGAAGAGCTTCTTTACAGCTCAGTTGAGAATGAAGAACACATATGTGTGCTGAAGGACCGCACGAAGCCAATCATCTTCACCATGGCAAGGTTGGACCGTGTGAAGAACATCACAGGACTTGTTGAGTGGTATGGTAAGAATGCGAAGCTGAGGGAGTTGGTGAACCTTGTGGTTGTGGCTGGAGACAGGAGGAAGGAGTCGAAGGACTTGGAAGAGAAGGCGGAGATGAAGAAGATGTATGGCCTCATTGAGACGTACAAGTTGAACGGCCAATTCAGATGGATTTCCTCGCAGATGAACCGTGTGAGGAACGGAGAGCTGTACCGTGTGATCTGTGACAGCAAGGGAGCCTTTGTGCAGCCTGCAGTGTACGAGGCTTTTGGTTTGACAGTGGTTGAGGCCATGACTTGTGGGTTGCCAACATTTGCCACATGCAATGGTGGTCCTGCTGAGATCATTGTTCATGGAAAATCTGGCTTCCACATTGATCCTTACCATGGTGACCGTGCTGCTGACCTCCTTGTTGAGTTCTTTGAGAAGTGCAAGGTCGACCCATCTCACTGGGACAATATCTCTCAAGCTGGTCTCCAACGTATTGAAGAGAAGTACACATGGCAAATTTACTCCCAGAGGCTTCTCACACTCACTGGTGTCTATGGTTTCTGGAAGCATGTGTCTAACCTTGACCGCCTTGAGAGTCGCCGCTATCTTGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCTGAGTCCGTGCCCCTTGCTGAAGAGTAA 2421 0.4824 MAAADRLTRVHSLRERLDETLSSNRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEVLQPAEYLRFKEELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSAFEHKFQEIGLERGWGDNAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHSHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPHTETSRRLTSFHPEIEELLYSSVENEEHICVLKDRTKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDSKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKCKVDPSHWDNISQAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAEE* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00445 806 Gene3D - 147 276 - -
Lapu3g00445 806 Gene3D Glycogen Phosphorylase B; 281 797 - -
Lapu3g00445 806 Pfam Glycosyl transferases group 1 565 737 IPR001296 GO:0016757
Lapu3g00445 806 Gene3D - 26 146 - -
Lapu3g00445 806 FunFam Sucrose synthase 12 146 - -
Lapu3g00445 806 PANTHER - 8 804 IPR012820 GO:0005985|GO:0016157
Lapu3g00445 806 NCBIfam sucrose synthase 25 803 IPR012820 GO:0005985|GO:0016157
Lapu3g00445 806 Pfam Sucrose synthase 9 554 IPR000368 GO:0005985|GO:0016157
Lapu3g00445 806 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 296 764 - -
Lapu3g00445 806 Gene3D Glycogen Phosphorylase B; 528 754 - -
Lapu3g00445 806 FunFam Sucrose synthase 147 276 - -
Lapu3g00445 806 FunFam Sucrose synthase 281 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00445 Lapu-Chr3 4541723 4548570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00445 1 806 Glycosyltransferase AT3G43190 84.758 0.0 1434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00445 K00695 - gmx:547508 1588.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00445 3 4541723 4548570 Lapu3g00445 3 4541723 4548570 ECH
Lapu3g00445 3 4541723 4548570 Lapu9g00355 9 3706428 3712902 PCT