Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00328 ATGAAACAAGGGTCACCAGCATCACCACCACCACCATCACCACCACAACCACCACCAACAACAAAAAATGTGATCAGGCTTCAGAGCAGTTTAACTCCATCTCGGTTAAGACTTCCTTCGAAGTACAGAGAGCCTCCAAGAACTCCACCAGAGGTTGTAAATGGGGTAGTGTCAACTCCAACAAGGAGAGCCAAGTCTGTGACTCCAGAGTTGAAGCACACTTCCAGGATCAAAAGGGGTCTAGTCCTGAACAAGGCCAAACCCAATGAAGAGGTTGTGGGAACCCACAGGGGTAGGGAAGCTGAAGAGGCTAAGGCTGTGTCTCGTTTTGTGAGGCCTCATGTTGTGGAACAGTTTGCTAGGCCAAGGAGTGCGGTTGGGGATTTTGCCATGAAGAGGGATAAGGAGGATCCTGATGGGAAGAGTAAGAAGGAATTGATGGAGAAGCTTGAGGTGAGTGAGAATTTGATCAATAATCTGCAGTCTGAAGTGCTGGCTTTGAAGGCTGAGTTGGAAAAAGTTAAGGGCTTGAATGTGGAGCTGGAATCTCACAACAGAAAACTCATTAAGGATGTTGCTGCTGCTGAATCCAAGGTGGTGTCTTTGGGTGGAAGTGAAAAGATGAAGGAGCCAATTGGAGAACATCAGAGCCCCAAATTCAAACACATTCAGAAACTCATTGCTGACAAATTAGAAAGGTCCGTAGTGAAAAAGGAAGCCATTACAGATGGATGCTTTGTTAAAACATCAACTCCAGCACCAACAGCGATTCCTACAATTCGTGAAACTACAGCTATAAGGATAGGAAGAAAGCCTGCACTAAAAGCATGCCTGCCACCGCCTCCACCACCTCCACCACCGATGCCACCATCAATCCCTTCTAGGCCTGTAGCAAAAGTGAATAACACCCAAAGGGCTCCTGCCTTTGTGAAATTATTTCACTCACTAAAGAATCAAGAAGAGATGAAAAACACAACAGGGTTGGTTAGACAGCATAAACCAGTTGACGTGAATGTACATAGCAGCATTGTTGGAGAGATTCAAAACCGTTCTGCTCATCTCTTAGCAATAAGGGCAGACATTGAAACAAAAGGAAATTTTATCAATGACCTTATAAAAAAGGTGGTAGAAGCGGCCTACACGGACATTGAAGATGTCTTAAATTTTGTTAATTGGCTTGATGGTGAACTCTCATCATTGCTTATTGGCTACATATTCTGTTTTCTACAGGCTGATGAACGTGCAGTCTTGAAGCATTTTAATTGGCCTGAGAGAAAAGCTGATGCCCTGCGTGAAGCTGCAGTTGAGTATCGTGAACTTAAATTGTTAGAACAAGAGATTTCCTCCTTCAAGGATGACCCTGAAATTCCATGTGGAGCTTCCTTGAGAAAGATGGCCACCCTATTAGACAAGTCTGAGTGCAGCATACAGAGACTAATGAAGTTGCGAAATTCTGTAATGCGTTCATATCAAGATTACAAAATTCCAACTGCTTGGATGCTTGACTCAGGAATCACGGCGAAGATTAAGCAGGCTTCTATGACTCTGGTCAAGATGTACATTAAAAGAGTTACAATGGAGCTTGGGTCTGCTAGGAATTCAGACAAACAGTCTAGTCATGAATCCCTTCTGCTTCAGGGCATGCATTTTGCATATAGAGCTCATCAGTTTGCTGGTGGTCTAGATGCAGAAACTCTGTGTGCTTTTGAAGAGATAAGGCAACATGTACCAGGACACTTGGCAGGGTCTCGAGAACTTTTGGCTGGCATAGCATCATCGTGA 1782 0.4428 MKQGSPASPPPPSPPQPPPTTKNVIRLQSSLTPSRLRLPSKYREPPRTPPEVVNGVVSTPTRRAKSVTPELKHTSRIKRGLVLNKAKPNEEVVGTHRGREAEEAKAVSRFVRPHVVEQFARPRSAVGDFAMKRDKEDPDGKSKKELMEKLEVSENLINNLQSEVLALKAELEKVKGLNVELESHNRKLIKDVAAAESKVVSLGGSEKMKEPIGEHQSPKFKHIQKLIADKLERSVVKKEAITDGCFVKTSTPAPTAIPTIRETTAIRIGRKPALKACLPPPPPPPPPMPPSIPSRPVAKVNNTQRAPAFVKLFHSLKNQEEMKNTTGLVRQHKPVDVNVHSSIVGEIQNRSAHLLAIRADIETKGNFINDLIKKVVEAAYTDIEDVLNFVNWLDGELSSLLIGYIFCFLQADERAVLKHFNWPERKADALREAAVEYRELKLLEQEISSFKDDPEIPCGASLRKMATLLDKSECSIQRLMKLRNSVMRSYQDYKIPTAWMLDSGITAKIKQASMTLVKMYIKRVTMELGSARNSDKQSSHESLLLQGMHFAYRAHQFAGGLDAETLCAFEEIRQHVPGHLAGSRELLAGIASS* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00328 593 MobiDBLite consensus disorder prediction 1 21 - -
Lapu9g00328 593 Coils Coil 143 198 - -
Lapu9g00328 593 MobiDBLite consensus disorder prediction 1 73 - -
Lapu9g00328 593 MobiDBLite consensus disorder prediction 22 36 - -
Lapu9g00328 593 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 9 578 IPR040265 -
Lapu9g00328 593 Coils Coil 426 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00328 Lapu-Chr9 3373879 3381591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00328 - - gmx:100820086 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00328 9 3373879 3381591 Lapu9g00328 9 3373879 3381591 ECH
Lapu3g00409 3 4134109 4142187 Lapu9g00328 9 3373879 3381591 PCT