Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00273 ATGGGTTCTCGGATTCAGCTTCTGGGTCTCTGCCTATGGTTTCACTTTGCATGTTTCATCTTCATTTTTGGTTCCAGAGTGGCTGTTGGAGGAGATGCAACAGTGAAAGGGACTGTTGCCATTGATGACAAAGTTGTGATTGGAACTATTGACGGTGATTTTGTGTGTGCAACTTTGGATTGGTGGCCTCCGGAGAAATGTGACTATGGTAGATGCAGTTGGGGTCTTGCTTCTCTTCTCAATCTGGACCTCAACAACAAGATTTTTCTAAATGCAGTGAAAGCCTTTTCACCTTTGAAACTCAGATTAGGTGGAAGTTTACAAGACAAGTTAATATATGGCACTGAAGATTACCACCAACCTTGTACTCCTTTTGTTAAGAACGCTTCTGAGATGTTTGGTTTCACCCAAGGATGCCTCCCAATGGAAAGATGGGATGAACTTAACAACTTTTTTGAAAAAGCAGGGGCTAAGATAATTTTTGGATTAAATGCTCTTGCTGGAAAATCAGTTCACGGTGGTTCTGCAAAAGGACCTTGGAATTCCACCAATGCTGAGTCCTTTATTAGATACAATGTTAGAAATGGCTACACCATTTATGGATGGGAACTTGGCAATGAATTGAGTGGGAGTGGAGTTGGAACAAGCATTACAGCAGACCAATATGCTTCTGATTTTGCTGCTTTACGAGACGTAGTTTACAATGCATATAGAGAGATTGATTCTAAGCCACTAGTCATTGCACCTGGAGGGTTCTTTGATGCAACCTGGTTCAAGGAATTCATAAGCAAATCTGGAAAATCTCTGGATGTGGTTACCCACCACATTTATAACCTTGGACCAGGAGTTGATGAACATCTTGTGGAAAGAATTCTGGACCCTTCCTATCTTGATAAAGAGGCTAGCACATTCAGTGGCCTCAAAAATATACTTGCAAGTACAGGTACCTCAGCAACAGCATGGGTTGGTGAGTCAGGAGGTGCCTATAATAGTGGTCATCATCTTGTATCCGATGCATTTGTTTATAGTTTCTGGTATTTGGATCAGCTTGGCATGTCAGCTACTTATGACACTAAAACATATTGCAGACAGAGTTTGATAGGAGGAAACTATGGTTTACTCAATACTACCAATTTCCTGCCAAATCCAGACTACTATAGTGCTCTTCTTTGGCATCGACTCATGGGAAGACATGTACTGTCAACTACCTTCTCTGGGACAAAAAAGATAAGAGCTTATGCACACTGTTCAAAGCTATCCAAGGGAATCACCGTACTGTTGATCAACCTAGACGGCAACACAACTGTTGAAGCTGACGTAACCTTCGACAGCAATGCAAAGAATTTGAGGCTCAGAAAGATGTCTAGTCATTCAAACACGATGGAATTACCCTTTGGGAGTGAAACTGAAAGAGAAGAGTACCATCTAACGCCACAAGATGGGAATATACATAGCCAAATCATGGTACTAAATGGAAAAGCTCTAAGGGTAAACTCAGCTGGTGATATTCCTCCTTTGGATCCTATATATGTGAACTCATCAGAGCCAATAAGTGTCGCTCCTTTCTCTATTGTATTTGCCCATTTACCTGATGCTGTTGTTACAGCTTGCGGCTAG 1617 0.4162 MGSRIQLLGLCLWFHFACFIFIFGSRVAVGGDATVKGTVAIDDKVVIGTIDGDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVKAFSPLKLRLGGSLQDKLIYGTEDYHQPCTPFVKNASEMFGFTQGCLPMERWDELNNFFEKAGAKIIFGLNALAGKSVHGGSAKGPWNSTNAESFIRYNVRNGYTIYGWELGNELSGSGVGTSITADQYASDFAALRDVVYNAYREIDSKPLVIAPGGFFDATWFKEFISKSGKSLDVVTHHIYNLGPGVDEHLVERILDPSYLDKEASTFSGLKNILASTGTSATAWVGESGGAYNSGHHLVSDAFVYSFWYLDQLGMSATYDTKTYCRQSLIGGNYGLLNTTNFLPNPDYYSALLWHRLMGRHVLSTTFSGTKKIRAYAHCSKLSKGITVLLINLDGNTTVEADVTFDSNAKNLRLRKMSSHSNTMELPFGSETEREEYHLTPQDGNIHSQIMVLNGKALRVNSAGDIPPLDPIYVNSSEPISVAPFSIVFAHLPDAVVTACG* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00273 538 SUPERFAMILY (Trans)glycosidases 50 395 IPR017853 -
Lapu9g00273 538 Pfam Glycosyl hydrolase family 79, N-terminal domain 37 351 IPR005199 GO:0016020|GO:0016798
Lapu9g00273 538 Gene3D Glycosidases 73 393 - -
Lapu9g00273 538 PANTHER HEPARANASE-RELATED 33 537 - -
Lapu9g00273 538 FunFam heparanase-like protein 3 74 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00273 Lapu-Chr9 2669638 2674100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00273 17 537 Glycoside Hydrolase AT5G07830 47.212 1.60e-179 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00273 K07964 - gmx:100802477 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00273 9 2669638 2674100 Lapu9g00273 9 2669638 2674100 ECH
Lapu3g00781 3 8226368 8230066 Lapu9g00273 9 2669638 2674100 PCT