Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00133 ATGGAATACCGAACCTTAGAACTCAACATCATATCGGCAAAAGACATAAAGAATGTTAATCTTTTCTCCAAGATGGATGTTTACGCCGTCGTTTCGCTCACCGGTGACCCTTTTCATCTGCAAAGTGTAACCACCCAGGTGGACAAAGATAGCGGCAGCAACCCCAAGTGGAACTTTCCGGTCAAATTCTCCGTCAACGAAACGCTGGCAAAGGAGAACCGTTTGACCCTCGAGGTAAAGCTCATCTCCAACCGCACCCTCGGCGACACCATCATCGGCACCGTCCATGTTCCCCTCAGGGAGCTTGTCGACAACCCCGCCGATGACAACAACTTCCGAAACGTCAGTTACAAGGTCCTGAAATCTTCAGGAAAATCCAAAGGATCATTCAATTTCTCTTACAAATTCGCCGAAAAGGTCTCTAATTCGGCAGCCACCGCCGCATCAAAAGCACAAACGGAGCCTGTCATGGCTTACCCTCCTCAGACATCCGCGGGATCGAGTTCAATTCCTCACGGAACATCACAACCTCCGCCCCCGAATACGGCGGCAGAATATGGTTATCCACCCGAAAAATATGGATATCCACCCCAACAGCCTCACGCTGGATACCCACCAGCTCAATCTGGTTACGGATATCCACCTCAAAATGGTTATGGTGGATATTCGCAGCAAAATAGTTATGGTGGATATCCACAACAAAATGGTTATGGTGGATATGCACAACAAACTGGTTATGGTTATCAGCAAGGGTACCCACAACCTGGATATGGGCATCCACAAGCTCATCAGAAACCAAAGAAGAACAAGTTTGGAATGGGGTTGGGAGCCGGATTGCTTGGTGGTGCTTTGGGTGGTATGTTGATTGGAGATATGGTATCTGATGCTGCGGATTATGAAGCGGGCTATGATGCTGGATTTGATGATGCTGGTGGATTTGATTTTTAA 948 0.48 MEYRTLELNIISAKDIKNVNLFSKMDVYAVVSLTGDPFHLQSVTTQVDKDSGSNPKWNFPVKFSVNETLAKENRLTLEVKLISNRTLGDTIIGTVHVPLRELVDNPADDNNFRNVSYKVLKSSGKSKGSFNFSYKFAEKVSNSAATAASKAQTEPVMAYPPQTSAGSSSIPHGTSQPPPPNTAAEYGYPPEKYGYPPQQPHAGYPPAQSGYGYPPQNGYGGYSQQNSYGGYPQQNGYGGYAQQTGYGYQQGYPQPGYGHPQAHQKPKKNKFGMGLGAGLLGGALGGMLIGDMVSDAADYEAGYDAGFDDAGGFDF* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00133 315 PANTHER INGRESSION PROTEIN FIC1 1 291 - -
Lapu9g00133 315 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Lapu9g00133 315 Gene3D C2 domain 4 137 IPR035892 -
Lapu9g00133 315 MobiDBLite consensus disorder prediction 149 172 - -
Lapu9g00133 315 MobiDBLite consensus disorder prediction 149 236 - -
Lapu9g00133 315 MobiDBLite consensus disorder prediction 250 269 - -
Lapu9g00133 315 Pfam C2 domain 5 107 IPR000008 -
Lapu9g00133 315 SMART C2_3c 5 111 IPR000008 -
Lapu9g00133 315 MobiDBLite consensus disorder prediction 218 236 - -
Lapu9g00133 315 CDD C2_SRC2_like 5 132 IPR044750 GO:0006952
Lapu9g00133 315 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 137 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00133 Lapu-Chr9 1200706 1202008 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00133 - - gmx:547451 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00133 9 1200706 1202008 Lapu9g00133 9 1200706 1202008 ECH
Lapu3g00255 3 2676598 2677654 Lapu9g00133 9 1200706 1202008 PCT