Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lapu3g00255 | ATGGAACACACAACGTTGGAACTCAACCTCGTATCAGCGAAGGATATAAAAAACGTCAATTTCTTCTCCAAGATGGACGTGTACGCCGTCGTTTCGCTCTCCGGCGGTCAAAAGATCAAGACTCCTGTCGACAGAAACGGCGGCACCAACCCCGCGTGGAACGTTTCCGTGAAGTTCACTGTCGACGAATCGCTCGCGCGCCAGAACCGCTTGACTCTCGAAATCAAGCTCCGCTGCGAGCGCAACCTCTCCGCCGACAAAGCAATCGGCCAGGTCCACGTCCCCGTCAAGGAGCTCCTCGACCAACCTGGTGATGGAAAATCCTTCCAGCATGTCAGTTACCAGGTTAGAAAACCCTCCGGCAAGCCCAAAGGAGCGTTCAGTTTTTCTTACAAATTCTCAGCGCCAGCGAAAGAGTCAGCGCCGTCAGCGCCGGTGTCCTCAGTTGCTCCCAAGATGGAGCCGGTCATGGCTTATCCTGCTCCCGCTGCGGGGTCCGCTTCTGGCTCGTATCCCGGCGTGTATCCTCCTCCGCCGCCACAATATGCGACCGGATATGGGTATCCTCCGCCGCCACAAGCGGGATATGGGTACGCGCCACAAGCACAAGCGGGTTATGGTTACGCCCCACAAGCACAAGCAGGGTACGGTTACCCTTCTGTTCCTCCTCAAAAAGCTGGGAAGAACAAATTTGGAATGGGATTGGGAGCGGGTTTGCTTGGAGGAGCATTGGGTGGGCTTCTGATTGGAGACATGATTTCTGATGGCTATGACGCTGGTTTTGGAGATGCTGGTGGATTTGATTTTTAA | 810 | 0.5481 | MEHTTLELNLVSAKDIKNVNFFSKMDVYAVVSLSGGQKIKTPVDRNGGTNPAWNVSVKFTVDESLARQNRLTLEIKLRCERNLSADKAIGQVHVPVKELLDQPGDGKSFQHVSYQVRKPSGKPKGAFSFSYKFSAPAKESAPSAPVSSVAPKMEPVMAYPAPAAGSASGSYPGVYPPPPPQYATGYGYPPPPQAGYGYAPQAQAGYGYAPQAQAGYGYPSVPPQKAGKNKFGMGLGAGLLGGALGGLLIGDMISDGYDAGFGDAGGFDF* | 270 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lapu3g00255 | 269 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 133 | IPR035892 | - | |
| Lapu3g00255 | 269 | CDD | C2_SRC2_like | 5 | 129 | IPR044750 | GO:0006952 | |
| Lapu3g00255 | 269 | SMART | C2_3c | 5 | 108 | IPR000008 | - | |
| Lapu3g00255 | 269 | PANTHER | INGRESSION PROTEIN FIC1 | 4 | 251 | - | - | |
| Lapu3g00255 | 269 | Gene3D | C2 domain | 3 | 135 | IPR035892 | - | |
| Lapu3g00255 | 269 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
| Lapu3g00255 | 269 | Pfam | C2 domain | 5 | 106 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lapu3g00255 | Lapu-Chr3 | 2676598 | 2677654 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lapu3g00255 | - | - | gmx:100784458 | 227.639 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lapu3g00255 | 3 | 2676598 | 2677654 | Lapu3g00255 | 3 | 2676598 | 2677654 | ECH | |
| Lapu3g00255 | 3 | 2676598 | 2677654 | Lapu9g00133 | 9 | 1200706 | 1202008 | PCT |