Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00129 ATGGATGCAAAACATCCTCAACATGCTTCACAACCTTTGAACTATCAGACATGGTTCTTGAAAGTTTCAATCCACTGTGAAGGTTGCAGGAGGAAAGTAAAGAAAGTTCTGAAGAGCATTGATGGTGTTTTCACTGCAACAATAGACCCACAGCAGAACAAAGTAACAGTCACTGGAAGTGTTGCTTTGGAGACCCTTCTCAGGAAACTGATCAGAGCCGGAAAACAAGCCGAGATTTGGCCGGAGAATGACGGAAAAATCTCCGGTAATGGGCAGAAGAAGAAGAAGAATGAAGCAAGACAACCACAGAGCATGGAAAAAGACAAGGGAACTAAAGATGCTTCTGCCAAGTCTAAAAGTGAGAACAAGAGCAGCAGCAACAAATCGCCGGAAAATTTCCCCCCCGATGACCAAATTCCGTCGGAGGGTGGTCGGAGCGAAGGTGGTGGTGGCTCTGCTAAGAAGAAGAAAAAGAAATTGCAGAGTGGTGGTGGCAATGGAAACAGAGGTTTGTGTTCAGCAGCTACTGGTGCACCTGCACACACTGGATTGCAGTTTCAGGATCTTGTGGGCCCAGTGAATGTGAACCCTACACGTCAGCATTCGCTTTTGTACCCAGAAAGTGGTGTTGCAGCTTATAACAGATTTTATCCTTCTTACTACATTCCATCTTCACCCTACACGTGTGCTGGTCTAGACCAAGATTGCCATCACTTTCAATCAGCACCGTTGGTTTCCTTTGAGTTCTTCAGTGATGAAAATGTTAATGGGTGCTCTGTTATGTGA 786 0.4542 MDAKHPQHASQPLNYQTWFLKVSIHCEGCRRKVKKVLKSIDGVFTATIDPQQNKVTVTGSVALETLLRKLIRAGKQAEIWPENDGKISGNGQKKKKNEARQPQSMEKDKGTKDASAKSKSENKSSSNKSPENFPPDDQIPSEGGRSEGGGGSAKKKKKKLQSGGGNGNRGLCSAATGAPAHTGLQFQDLVGPVNVNPTRQHSLLYPESGVAAYNRFYPSYYIPSSPYTCAGLDQDCHHFQSAPLVSFEFFSDENVNGCSVM* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00129 261 ProSiteProfiles Heavy-metal-associated domain profile. 15 78 IPR006121 GO:0046872
Lapu9g00129 261 Pfam Heavy-metal-associated domain 22 73 IPR006121 GO:0046872
Lapu9g00129 261 MobiDBLite consensus disorder prediction 120 134 - -
Lapu9g00129 261 CDD HMA 20 78 IPR006121 GO:0046872
Lapu9g00129 261 Gene3D - 14 79 - -
Lapu9g00129 261 MobiDBLite consensus disorder prediction 81 174 - -
Lapu9g00129 261 MobiDBLite consensus disorder prediction 88 119 - -
Lapu9g00129 261 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 9 261 - -
Lapu9g00129 261 SUPERFAMILY HMA, heavy metal-associated domain 14 81 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00129 Lapu-Chr9 1158667 1160116 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00129 - - vra:106761779 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00129 9 1158667 1160116 Lapu9g00129 9 1158667 1160116 ECH
Lapu3g00260 3 2712601 2713845 Lapu9g00129 9 1158667 1160116 PCT