Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00119 ATGGGTGCGATGACCACCAACCGCAAGCGCACCGAAGAATGCATGAACGTGAACCACACTACTTCAGATTCCTCCCGAAAGCGTTCCAAATTATCGACCAAACCCGTTTCGTCCGCCGCCAGCGCCATCGCGCGACTCTCCCGGTATCCGCAGGTTTGCGCGCAGTTGGTAAGGGAGGTTCACGCGCCGTGTCGGTCGACAAAATTTCCACTCGCTGCTAGGGTTAGCGCCCGCGCAGGCGAAGCCATGGGGAACGTTCTGATCGCGAAATACGAGAAGGCGAAGCGTTCGGCGTTGGCGAAGTGTAGGTTCGTGGTGGAGAAGGGGAAGGAGGTGATTGTAGTGGACGCGGAGAGTGACGAGCCTTGCGCGAATTCGAGTGTGGAAGAGGTGGGTGGTGACAGTGACAAGGTTAGGGTTCAGCAGCAGTCGCAGTCGACGTTGTCATTTGATTCGGAGTTGAGGAATGCGGAGTTGAAGGTGCCGAGTAGAGGGGAAGTCTGGGGTTCTGAGACGCAGCTTGATGTTGAAAGTGTTCATGCGTATAAGAAGTTGCTTGAGGATGTTGGGAGGAGAAGTGGCACGTTTCAGAGGCTAAAGTTTGAGATTGACCTGAATGAGAAGCGCAGAGACCATTTTAATTTGTTGAGGCCGAAGAAGGAATTGTGTGAACATCGGAAAATTGAAGGAGAACCATTTGTTGCTCTTAGTAGTGAGGAAGAAGATGAGATTGAACGTGCCTTCTCTGCCAACCGGTGGACAATCTTGATTACCCACGAGATTTCTAATATTGAGATTACTGGAGAGAAGTTTCGGTGCCTTAGGCCAACTGGATGGTTAAATGATGAGGTGATAAATTTGTACCTAGCTTTGCTGAAGGAGAGGGAACAAAGACAACCACAGAAATTTCTGAAATGTCATTTTTTCAATACCTTTTTCTACAAAAGGTTAATAAGTGGTCCGAATGGTTATGATTTCAAATCTGTCAGAAGATGGACAAGCCAACGGAAATTGGGATACAGTTTATTTGAATGTGATAAAATATTTGTCCCTATCCATCAAGAGATACATTGGTGCTTGGCAGTTATCAATAAGAAAGATAAGAAATTGCAGTATCTTGACTCAATGAAAGGAGAGGATAGTTTTGCGCTAGAAAAGCTGGCTAAATATTTTGCGGATGAAGTAAATGACAAGACTGGAAAAGATATTGGTGTAAATACCTGGAAAAAAGAATTTGTGAAGGACCTTCCTGTTCAGAAAAATGGGTGTGATTGTGGGGTGTTTATGATCAAATATGTGGACTTTTATAGCAGGGGCCTGGAGCTGTATTTTGACCAGGAAAACATGTCTTACTTCCGGCGTCGGACAGCTAAGGAGATATTGAGATTGAAAGCTGAATGA 1401 0.4597 MGAMTTNRKRTEECMNVNHTTSDSSRKRSKLSTKPVSSAASAIARLSRYPQVCAQLVREVHAPCRSTKFPLAARVSARAGEAMGNVLIAKYEKAKRSALAKCRFVVEKGKEVIVVDAESDEPCANSSVEEVGGDSDKVRVQQQSQSTLSFDSELRNAELKVPSRGEVWGSETQLDVESVHAYKKLLEDVGRRSGTFQRLKFEIDLNEKRRDHFNLLRPKKELCEHRKIEGEPFVALSSEEEDEIERAFSANRWTILITHEISNIEITGEKFRCLRPTGWLNDEVINLYLALLKEREQRQPQKFLKCHFFNTFFYKRLISGPNGYDFKSVRRWTSQRKLGYSLFECDKIFVPIHQEIHWCLAVINKKDKKLQYLDSMKGEDSFALEKLAKYFADEVNDKTGKDIGVNTWKKEFVKDLPVQKNGCDCGVFMIKYVDFYSRGLELYFDQENMSYFRRRTAKEILRLKAE* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00119 466 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 131 459 - -
Lapu9g00119 466 Coils Coil 457 466 - -
Lapu9g00119 466 Gene3D Adenoviral Proteinase; Chain A 223 464 - -
Lapu9g00119 466 FunFam Ubiquitin-like-specific protease ESD4 223 464 - -
Lapu9g00119 466 ProSiteProfiles Ubiquitin-like protease family profile. 264 436 IPR003653 GO:0006508|GO:0008234
Lapu9g00119 466 SUPERFAMILY Cysteine proteinases 232 464 IPR038765 -
Lapu9g00119 466 MobiDBLite consensus disorder prediction 1 35 - -
Lapu9g00119 466 Pfam Ulp1 protease family, C-terminal catalytic domain 279 460 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00119 Lapu-Chr9 1101161 1108063 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00119 K08592 - gmx:100802161 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00271 3 2795292 2801920 Lapu9g00119 9 1101161 1108063 PCT