Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00066 ATGGGCGCTCCGGAGAAATCGCAGACAAACGCTAATTCGATGCAGCGTGTCAAGGTCTATCGTCTGAATGGTGATGGGAAATGGGATGACCAAGGCACTGGGCATGTCACTGTTGATTATTTGGAGCGGTCAGAAGATCTTGGTTTATTTGTTTATGACGAAGAAGACAATGAAAACATACTTTTGCATCGCATATCTCCTGATGATATTTACAGAAAACAAGAAGATACAATTATTTCATGGAGAGATCCAGAATATGCTACTGAATTGGCACTTAGCTTTCAAGTACCTGGTGGTTGCTCTTACATATGGGACCATATTTGCAATGTGCAAAGGAATATGCATTTTAATACTTTAAATAGTGAAGCATTTCATAGTGTGAACAGTGAGTCAAGGGACTTGCCAGCAGTGGAATTGTCAACGCTTCCTTTGATTCTTAAGATGGTGGTTGAGAATGGTAATACAGATCAGTCACGGCTTGCGGAACTAATTTTAAGTGATCAAGATTTTTTTAGGAAACTCATGGAAGTATTCAGAGTTTGTGAAGACTTGGAAAATATGGATGGCCTTCACATGATTTTCAAAATAATCAAAGGGATCATTTTGCTTAACAGTACACAAATTTTTGAGCGAATATTCAGTGATGAGTTAATGATGGACATTATTGGTACCCTTGAGTATGATCCAAAGGTTCCCCATGTTCAACATCATCGTAAATTCTTAAAGGAGCATGTTATTTTTAAGGAGGCCATACCTATAAGAAACTCAATTGTATTGTCTAAAATACATCAGACATATAGAGTTGGTTTTTTGAAGGATGTGGTTTTGGCTAGAGTTTTGGATGAGGCTACTGTTGCTAATCTTAACTCCATAGTACATGCAAACAATGCCATTGTTGTTTCTTTATTGAAGGATGACAGCACATTTATCCAGGAGTTGTTTGCTAGGTTAAAATCGCCCACCACCTCTCCTGAATCAAAGAAAAATATGGTCCATTTCTTGCATGAGTTTTGTAGTTGTAGCAAGAGCTTACAGATGGTGCAGCAGCTTCGGCTCTTTCGTGATCTGATGAATGAGGGCATCTTTGACATCATCTCTGACGTACTCTTGCAAAGTCAAGACAAGAAACTTGTGCTTACTGGAACAGATATCCTCATTCTCTTCTTGAATCAGGATCCTAATCTTCTGCGGTCTTATGTTGTTAGACAGGAGGGAATTACACTTCTTGGACTACTGGTTAGAGGCATGATTACAGATTTTGGAGATGATATGCATTGCCAGTTTCTTGAGATTCTTCGAAGTTTATTATGTTCATTGTCTGGTGCACAGAGGGACACTATTGTTGATATTTTCTATGAGAAGCATCTGAGTCAACTGATTGAAGTGATAACAACGTCATGCCCTTCAGAAAATGTTCATGTGAATAGCAAAATAATAGACTGTGGCCAAGTAAAGTATCAGAGTGGGACAAAGCCAGAGATACTATCAAACATATGTGAATTGCTATGCTTTTGTGTCCTACACCATCCATACAGGATAAAGTGTAACTTTCTTCTGAATAAAGTAACGGATAAAATTCTGTTACTGTCACGAAGAAGAGAAAAATACCTTGTTGTTGGCGCTGTTCGGTTTGTTCGTGCTATTCTCTCACGTCATGATGAGCATCTTATAAATCATTTCGTCAGAAATGATCTTCTGAAACCAATTGTGGAAGCCTTTGTTGCTAATGGTAATCGCTACAATCTGCTTAATTCAGCTGTTCTTGAACTTTTTGAGTATATTCGCAAGGAGAATATGAAATTATTGCTGAAGTATATAGTTGATTCTTTCTGGGACCAGTTAGTGAAATTTGAGTACTTGGTTTCCATTCATTCATTGAAAATAAAATATGAGCAGTGTTTGGACAACGATGACACGGAAGGGACTGGTGTTATGAATGACCTTCGAAGACGACTTGATGAGCGTGCTCCAGAGAAAGAAGAGGAAGACTACTTTAATGAGGACAGTGATGAGGAGGATACGACCTCTGCATCCAATTCACGTAATCAGAAAGTGAAACAACGGCAACCTGCCTTATCCAATGGAGATGCTGCAAGCTACTCAAACTTAAGTCCGAGATCTGGTGGGCTGGTTGACTATGATGATGATGAGGATGAAGACTACAGGCCACCACCAAGGAATAAGCCAGAAGCATCTGAAGAGTATGAAGGAACGATGGAATCTCTCAGGCTGAAAAGAAAATTGCCAAAGGCCGAGATTGCACAGATGCCAAAGTTGTCAAAAAATTCAAAATCTAAAGATCGTGTTTTTGCTGCCTTGTGTTCAACATTGAGCCAGGCTGTGCTACCTCGTAAGAAACCTATAGTCGACTTTATTACTGTTCCTTGTATAGAGGACAATCAAGAAAAGGAGCAACATGTTTCTGGAAACTGCTTTGAGAATAGCAACGCATCGGCTGAGGTGAACCATATAGAGAAAGAAACTGCTGCCTGTAGAAATTCTTCTGATAGGTTGTACGGCACATCTGACAATGGACAGTTGGGTGGTGAGGAGCATACAATGGTTTCACCAAAATCCCCGCCAGAGATGGCTGTTAATGGATCTTGA 2607 0.3959 MGAPEKSQTNANSMQRVKVYRLNGDGKWDDQGTGHVTVDYLERSEDLGLFVYDEEDNENILLHRISPDDIYRKQEDTIISWRDPEYATELALSFQVPGGCSYIWDHICNVQRNMHFNTLNSEAFHSVNSESRDLPAVELSTLPLILKMVVENGNTDQSRLAELILSDQDFFRKLMEVFRVCEDLENMDGLHMIFKIIKGIILLNSTQIFERIFSDELMMDIIGTLEYDPKVPHVQHHRKFLKEHVIFKEAIPIRNSIVLSKIHQTYRVGFLKDVVLARVLDEATVANLNSIVHANNAIVVSLLKDDSTFIQELFARLKSPTTSPESKKNMVHFLHEFCSCSKSLQMVQQLRLFRDLMNEGIFDIISDVLLQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGITLLGLLVRGMITDFGDDMHCQFLEILRSLLCSLSGAQRDTIVDIFYEKHLSQLIEVITTSCPSENVHVNSKIIDCGQVKYQSGTKPEILSNICELLCFCVLHHPYRIKCNFLLNKVTDKILLLSRRREKYLVVGAVRFVRAILSRHDEHLINHFVRNDLLKPIVEAFVANGNRYNLLNSAVLELFEYIRKENMKLLLKYIVDSFWDQLVKFEYLVSIHSLKIKYEQCLDNDDTEGTGVMNDLRRRLDERAPEKEEEDYFNEDSDEEDTTSASNSRNQKVKQRQPALSNGDAASYSNLSPRSGGLVDYDDDEDEDYRPPPRNKPEASEEYEGTMESLRLKRKLPKAEIAQMPKLSKNSKSKDRVFAALCSTLSQAVLPRKKPIVDFITVPCIEDNQEKEQHVSGNCFENSNASAEVNHIEKETAACRNSSDRLYGTSDNGQLGGEEHTMVSPKSPPEMAVNGS* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00066 868 Gene3D - 10 131 IPR011993 -
Lapu9g00066 868 MobiDBLite consensus disorder prediction 834 868 - -
Lapu9g00066 868 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
Lapu9g00066 868 MobiDBLite consensus disorder prediction 720 749 - -
Lapu9g00066 868 SUPERFAMILY ARM repeat 288 596 IPR016024 -
Lapu9g00066 868 SUPERFAMILY PH domain-like 15 111 - -
Lapu9g00066 868 PANTHER ATP SYNTHASE GAMMA-RELATED 16 781 - -
Lapu9g00066 868 MobiDBLite consensus disorder prediction 676 706 - -
Lapu9g00066 868 MobiDBLite consensus disorder prediction 834 849 - -
Lapu9g00066 868 Gene3D - 279 603 IPR011989 -
Lapu9g00066 868 MobiDBLite consensus disorder prediction 639 659 - -
Lapu9g00066 868 MobiDBLite consensus disorder prediction 639 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00066 Lapu-Chr9 558634 579664 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00066 K17491 - gmx:100802657 1468.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00066 9 558634 579664 Lapu9g00066 9 558634 579664 ECH
Lapu3g00326 3 3259067 3275792 Lapu9g00066 9 558634 579664 PCT