Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00326 ATGGGAGCGCCGGAGAAATCACAGGCTAACACTAATTCGATGCAGCGTGTCAAGGTATATCGACTGAATGATGAAGGGAAATGGGATGACCAGGGTACTGGTCATGTCACTGTTGATTATTTAGAGCGATCAGAAGAGCTGGGCTTATTTGTTTATGACGAAGATGATAATGAGACCATACTTTTGCATCGCATCAGTTCTGATGATATTTATAGGAAACAAGAAGATACAATCATCTCATGGAGAGACCCAGAATATGCTACTGAACTGGCACTTAGCTTTCAAGAGCCTAGCGGTTGCTCTTACATATGGGACCATATTTGTAATGTGCAGAGGAATATGCATTTTAATACATTAAATAGTGAGCCGTTTCACAGTGTCAATAGTGAACCCAGGGAGTTGCCTGCTGTTGAGCTGTCAACACTTCCTTTGATTTTAAAGACTGTGGTTGACACTGGCTTTGCAGATCAGTTGCGGCTTACAGAACTAATATTAAGTGATCAAGAGTTTTTTCGGAAGCTGATGGAAGTATTCAGAATGTGCGAAGACTTGGAAAATATTGATGGCCTTCACATGATGTTCAAAATAGTCAAAGGGATTGTTTTGCTGAATAGTCCGGCAATTTTTGAGAGAATTTTTAGTGATGACTTTATAGTGGACATTATTGGTGCCCTCGAGTATGATCCAGAGCTTCCTCGTGTTCAACATCATCGTAAATTCTTAAAGGAGCATGTTGTTTTTAAGGAGGCCATACCTATAAAAGATCCCGTTGTCTTGTCAAAGATACATCAGACATATAGAGTTGGTTTTTTGAAGGATGTTGTTCTGGCTAGATTATTGGATGAGGGTATTGGTGCAAATCTTAACTCCATAATACATTCAAACAATGCCTATGTTGTCTCTTTATTGAAGGATGATAGTACATTTATTCAGGAGTTGTTTGCTAGGCTAAAATCACCGACCACATCTCAAGAATCAAAGAAGAATTTGGTTTATTTCTTGCATGAATTTTGTAGTTTGAGCAAGAGCTTGCAGATGGTCCAGCAGCTTCGGCTTTTTAGGGATCTAATGAATGAAGGCATCTTTGACGTTGTTGCTGATGTCTTACAAAGTCAAGACAAAAAGCTTGTGCTAACTGGAACAGATATCCTCATTCTTTTCTTGAATCAAGATCCTAATCTCTTGAGATCCTACTTTGTTCGACAGGAAGGATTTGCTCTTCTAGGACTTTTGGTTAAAGGAATGCTAACAGATTTTGGAGAGAACATGCACTGCCAGTTTCTTGAAATTCTTCGCAATTTATTGGACTCATGCACGTTGTCTGGATCACAGAGGGACACTATTATTGACATATTCTTTGAGAGGCATTTGGGGCAATTGATTGAGGTTATAACAGCATCTTGTCCTTCAGAAAATGCTGCTGGTGAAAGTGATAAATCAATAGGTCCTGGACGAAGTGCTCATTTTCAGAATGGAATGAAGCCAGAGATACTATCAAACATATGTGAATTACTATGCTTTTGTGTCCTACATCATCCATACAGGATAAAGTGTAACTTTCTTCTTAATAACGTTTTTGAAAAAATATTGCTATTGACGCGGAGAGCGGAAAGATACTTAGTTGTTGGTGCAGTCCGGTTTGTTCGAACTATTCTCTCACGCCATGATGAGCATTTGATAAATTATGTTATTAGGAATAATGTTCTCAAACCAATCATTGATGCCTTTGTTTCCAACGGCAATCGCTACAATCTGCTCCATTCTGCTGTTCTGGAGCTTTTTGAGTTTATTAGGAAGGAGAATCTGAAACTATTGGTGAAATACATAGTAGATTCTTTTTGGGACCAGCTGGTGAAATTTGAGTATTTGGCGTCTATTCACTCACTGAAAGTAAAATACGAGCAGTGTTTGGATAATGGTGGGACAAAAGATGCTGCAACTGTTGTGGACCTTCGTAGGCGAAATGATGAGCGTGCTTTGGAGAGAGAAGAAGAACGGTACTTTAACGAGGACAGTGATGAGGAGGATATTGCTTCTGCATCTGTTCCGCGGAATCAGAAAGGACACCAGCAACCTAATCTATCCAATGGAGTTGCTGCAAGCTATTCACAGTTAAGTCCAAGGTCACTGGTTGACTATGAAGATGATGAGGACGATGAAGATTACAAACCACCACCAAGGAAGCAGCCTGAAACTTCTGAGGAAGATGATGGGGTAATGGAGTCTCTCAGGCTGAAGAGGAAGTTACCTACAAAAGATAAGGAACCTGAACTTGTGAAGAAACATAAGTTATCAAAGAATTCTAAATCTAAAGATAGTGTTTTTGCTGCCTTGTGTTCAACATTGAGCCAAGCTGCGCTACCTAGTAAGAAAACGTCAATCAGCATTCAGACAAGTGCTCGAACAGTTGAGGGAAGGACGGGCTCAAGTGAAAATAATCAGGGAAATGTACAAAGTATTTCTAGAAGCAGTTCCGATAATAGCAACATTGCAGCAGAAGACAATCACATAGAGAAAGAGGCTGGAGATTCTAGAAGCTTTTCTGATTGCTTGCATGCAAAATCAGATAACATACAATTGGGTGGAGAGGAACGTCCGTTGGTTGCGCCAAAGTCCTCACCAGAGATGGCTGTAAATGGATCGTAA 2646 0.3998 MGAPEKSQANTNSMQRVKVYRLNDEGKWDDQGTGHVTVDYLERSEELGLFVYDEDDNETILLHRISSDDIYRKQEDTIISWRDPEYATELALSFQEPSGCSYIWDHICNVQRNMHFNTLNSEPFHSVNSEPRELPAVELSTLPLILKTVVDTGFADQLRLTELILSDQEFFRKLMEVFRMCEDLENIDGLHMMFKIVKGIVLLNSPAIFERIFSDDFIVDIIGALEYDPELPRVQHHRKFLKEHVVFKEAIPIKDPVVLSKIHQTYRVGFLKDVVLARLLDEGIGANLNSIIHSNNAYVVSLLKDDSTFIQELFARLKSPTTSQESKKNLVYFLHEFCSLSKSLQMVQQLRLFRDLMNEGIFDVVADVLQSQDKKLVLTGTDILILFLNQDPNLLRSYFVRQEGFALLGLLVKGMLTDFGENMHCQFLEILRNLLDSCTLSGSQRDTIIDIFFERHLGQLIEVITASCPSENAAGESDKSIGPGRSAHFQNGMKPEILSNICELLCFCVLHHPYRIKCNFLLNNVFEKILLLTRRAERYLVVGAVRFVRTILSRHDEHLINYVIRNNVLKPIIDAFVSNGNRYNLLHSAVLELFEFIRKENLKLLVKYIVDSFWDQLVKFEYLASIHSLKVKYEQCLDNGGTKDAATVVDLRRRNDERALEREEERYFNEDSDEEDIASASVPRNQKGHQQPNLSNGVAASYSQLSPRSLVDYEDDEDDEDYKPPPRKQPETSEEDDGVMESLRLKRKLPTKDKEPELVKKHKLSKNSKSKDSVFAALCSTLSQAALPSKKTSISIQTSARTVEGRTGSSENNQGNVQSISRSSSDNSNIAAEDNHIEKEAGDSRSFSDCLHAKSDNIQLGGEERPLVAPKSSPEMAVNGS* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00326 881 PANTHER ATP SYNTHASE GAMMA-RELATED 16 800 - -
Lapu3g00326 881 Gene3D - 288 615 IPR011989 -
Lapu3g00326 881 MobiDBLite consensus disorder prediction 832 850 - -
Lapu3g00326 881 MobiDBLite consensus disorder prediction 683 708 - -
Lapu3g00326 881 MobiDBLite consensus disorder prediction 786 831 - -
Lapu3g00326 881 SUPERFAMILY ARM repeat 281 626 IPR016024 -
Lapu3g00326 881 MobiDBLite consensus disorder prediction 721 763 - -
Lapu3g00326 881 Gene3D - 10 128 IPR011993 -
Lapu3g00326 881 MobiDBLite consensus disorder prediction 786 881 - -
Lapu3g00326 881 MobiDBLite consensus disorder prediction 662 772 - -
Lapu3g00326 881 SUPERFAMILY PH domain-like 15 111 - -
Lapu3g00326 881 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00326 Lapu-Chr3 3259067 3275792 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00326 K17491 - gmx:100786790 1588.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00326 3 3259067 3275792 Lapu3g00326 3 3259067 3275792 ECH
Lapu3g00326 3 3259067 3275792 Lapu9g00066 9 558634 579664 PCT