Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00429 ATGGATTTTCTCAAGACCTCTTCATTTGTTAGAGTCACTGCCCTCGCACTCTTCTCCCTCACCCTCTTTGTCTTCCTCTTCACGCGTTTCTCTCCCACCTCTTATTCTTCCTTCGCCTTCTCCTCTTCCGCTGCTGTGGATGTACCCTCGCCGGAGCAGCCACCACCTTCTCCTCCTACTCCGCCGCCGGCGCCGCCTCGTCTTCCGGCGCCGAAAGCGTTACCTGTGCCGCCGTTACCGCCGGTGGAGCGGATGGGGGTGTTGGACGGGAACGGCGTCATGACGGAGGATTTCAGAGTGGGGGAGTTGGATCCGGGTTTCGAGGAGGAATGGCAAAACGGCAGCATTTTACGCGGAGTAAAGGAGAGTGGTGGTGTGAGGGAGAAAGTGGAGAAGTATAAGGTGTGTGATGTGAGGATGGTGGATTATGTGCCGTGTTTGGATAACGAGGAAGCGATGAAGAAGTTGGAAGGGAGCGTGAGAGGGGAGAAGTACGAGCGGCATTGTCTCCAGGAGGGGATGGGCCTCAACTGTCGGGTGCCACCGCCCAAGGGGTACCGGAGGCCCGTCCTTTGGCCGAAAAGCAGAGACGAGGTTTGGTTCAGTAATGTACCCCATACACGTTTGGTTGAGGATAAAGGTGGCCAAAATTGGATATCAATAAAGAATGATAAATTTGTTTTCCCTGGTGGTGGAACTCAATTTATACATGGTGCAGATAAATACCTGGATCAGATTTCTGAGATGGTTCCGGACATTTTATTTGGTAAAAACACCAGAGTTGCTTTAGATGTTGGCTGTGGAGTGGCAAGTTTTGGTGCCTTTTTAATGCAACGTAATGTGACCACTCTTTCCATAGCTCCAAAAGATGTTCATGAAAATCAGATTCAATTTGCGCTTGAGCGAGGTGTGCCTGCCATGGCAGCAGTATTTGCTACACACCGCTTGTTATTCCCAAGCCAGGCATTTGATCTAATCCATTGTTCAAGATGCAGAATTAATTGGACTCGTGATGATGGAATTTTGCTTCTTGAGGCCGACAGGCTCCTGAGGGCAGGTGGCTACTTTGTCTGGGCAGCACAGCCTGTTTACAAACATGAAGAGACCCTTCAAGAACAATGGAAAGAAATGGAGAACCTGACAACTCGCATTTGTTGGGAACTTGTACAAAAGGAGGGTTATATTGCTATATGGCGGAAACCTATGAACAATAGCTGCTACCTTAGTCGAGACATGGCTGTGCATCCTCCATTATGTGAGTCCAATGATGATCCAGATAATGTTTGGTATGTCAATCTTACGGCTTGCATCACTCAATTACCTAGTAATGGATTTGGAGCAAGTGTTGTGGAGTGGCCTTTGCGTCTCCATGAACCACCAAAAAGGCTCCAAAGCATCCAATTGGATGCCATTGTATCCAGAGATGAACTCTTGAGGGCTGACACAAAATACTGGTTTGAAATAATAGAAAGTTATGTTCGGGCTTTCCGTTGGCAGGAGTATAACCTGAGAAATGTGATGGACATGAGAGCAGGATTTGGGGGGGTTGCTGCTGCACTGCATGATCTCCATATTGACTGTTGGGTTATGAATGTTGTCCCTGTTAGTGGATTTAATACCTTACCTGTTATATATGACCGTGGGCTGATAGGAGTTGTTCATGAATGGTGTGAACCATTTGACACCTACCCAAGAACATATGATCTGCTGCATGCAGCAGGTCTTTTCTCTGTTGAAAAAAAGAGGAAAAAGTGCAACATCTCAACCATTATGCTTGAGATGGATCGGATGCTAAGACCAGGAGGGCGTGTATATATACGTGACTCCACACTTGTTATTGGTGAACTTGAAGAAATTGCAACTGCATTGGGATGGTCAAATTCCCTAAATGATGTAGGAGAGGGTCCCTATTCAAGTTGGAAGATATTAAGGTCTGAGAAACCATTCTGA 1950 0.4718 MDFLKTSSFVRVTALALFSLTLFVFLFTRFSPTSYSSFAFSSSAAVDVPSPEQPPPSPPTPPPAPPRLPAPKALPVPPLPPVERMGVLDGNGVMTEDFRVGELDPGFEEEWQNGSILRGVKESGGVREKVEKYKVCDVRMVDYVPCLDNEEAMKKLEGSVRGEKYERHCLQEGMGLNCRVPPPKGYRRPVLWPKSRDEVWFSNVPHTRLVEDKGGQNWISIKNDKFVFPGGGTQFIHGADKYLDQISEMVPDILFGKNTRVALDVGCGVASFGAFLMQRNVTTLSIAPKDVHENQIQFALERGVPAMAAVFATHRLLFPSQAFDLIHCSRCRINWTRDDGILLLEADRLLRAGGYFVWAAQPVYKHEETLQEQWKEMENLTTRICWELVQKEGYIAIWRKPMNNSCYLSRDMAVHPPLCESNDDPDNVWYVNLTACITQLPSNGFGASVVEWPLRLHEPPKRLQSIQLDAIVSRDELLRADTKYWFEIIESYVRAFRWQEYNLRNVMDMRAGFGGVAAALHDLHIDCWVMNVVPVSGFNTLPVIYDRGLIGVVHEWCEPFDTYPRTYDLLHAAGLFSVEKKRKKCNISTIMLEMDRMLRPGGRVYIRDSTLVIGELEEIATALGWSNSLNDVGEGPYSSWKILRSEKPF* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00429 649 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 178 388 IPR029063 -
Lapu8g00429 649 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 142 647 IPR004159 GO:0008168
Lapu8g00429 649 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 485 624 IPR029063 -
Lapu8g00429 649 Gene3D Vaccinia Virus protein VP39 237 403 IPR029063 -
Lapu8g00429 649 FunFam probable methyltransferase PMT3 238 401 - -
Lapu8g00429 649 MobiDBLite consensus disorder prediction 46 76 - -
Lapu8g00429 649 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 126 631 IPR004159 GO:0008168
Lapu8g00429 649 MobiDBLite consensus disorder prediction 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00429 Lapu-Chr8 20273188 20287240 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00429 - - pvu:PHAVU_001G067200g 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00429 8 20273188 20287240 Lapu6g00376 6 3755364 3760489 PCT