Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00376 ATGGCAAGCATGGCAAGAGGAAGAGCAGATGTGAACTCAAGGAAAAAATTGGTCATAACTGTGTTGGTTTTGGTGATTGTTGGTGCTTTCTTTTACTTTTATTCTCAGAGTAGTGATTCATCTATTGTTGAGTATGGTGATAAATCTTTGAGACACTTTGGTTTGAAAGGGGAGAAAGATGAGGGTGAATCTTCCTCCACACTTGTTGGAGGAGAGGACAGTGCTATACCAAAGAGCATTCCAGTCTGTGATGATCGTCTATCAGAGCTTATTCCTTGTCTGGACAGAAACTTGATATACCAAACAAGATTGAAGCTTGATTTATCTGTGATGGAACACTATGAAAGACACTGCCCAACACCTGAGAGGCGATATAATTGTTTAATTCCTCCTCCTCCAGGGTACAAGATTCCAATCAAGTGGCCCAAAAGCAGAGACCAGGTGTGGAAGGCAAATATACCTCATACCCATCTTGCAACAGAAAAATCTGACCAGAACTGGATGGTTGTGAAAGGTGAAAAAGTAGTTTTTCCTGGTGGAGGAACCCACTTCCATTATGGTGCTGATAAATACATTGCTTCAATTGCTAATATGCTTAATTTTCCGAACAATAATATAAACAATGAGGGAAGAGTCAGGTCTGTTCTTGATGTTGGCTGTGGAGTTGCTAGCTTTGGAGGATATCTTCTTTCTTCTGATGTGATAGCAATGTCATTGGCTCCAAATGATGTTCATCAAAATCAAATTCAGTTTGCCTTAGAGAGGGGAATTCCAGCATATCTTGGTGTCTTAGGGACCCTAAGGCTCCCTTACCCGAGTAGATCTTTTGAATTTGCTCATTGTTCTCGCTGTAGAATTGATTGGCTTCAGAGAGATGGTATACTTCTCCTTGAGCTGGATAGGTTACTAAGGCCAGGAGGTTATTTTGCATACTCATCTCCTGAAGCCTATGCACAGGATGAGGAGGATAGGAGAATATGGAGAGAAATGAGTGCTCTTGTGGAGAGGATGTGCTGGAAAATTGCTGCTAAGAGGAATCAGACTGTTATTTGGGTCAAGCCTCCCACAAATAGTTGCTACTTGAAGAGATCGCCTGGTACTCTGCCTCCACTTTGCCAATCTGGTGATGATCCTGATGCTGTTTCCGGAGTTAAAATGAAAGCTTGCATTTCACGCTATTCTGATCAAATGCACAAAGCAAAAGGAAGTGGTTTGGCTCCTTGGCCAGCTCGATTGACTACTCCACCTCCTCGTCTGGCAGAAATTCACTATTCTACTAAAATGTTTGAGAAGGACGTGGAAGTTTGGCAACAACGAGTTCATAATTACTGGAGCAAGCTAGGCAGTAAGATTAAAGCAGACACAATTCGGAATGTGATGGATATGAAGGCAAATATAGGTTCATTTGCGGCAGCTCTGAAGGACAAAGATGTTTGGGTTATGAATGTGGTGCCAGAAAATGAACCAAAATCTCTCGCCATAATATATGACAGAGGTCTGATAGGAGCAGTTCACAACTGGTGTGAAGCTTTTTCGACCTACCCTCGAACGTATGATCTGCTCCATGCATGGACTGTATTTTCTGATATTATTAAGAAAGAATGCAGTTCAGAAGATTTGTTGATTGAGATGGATAGAATCCTGAGGCCAAAGGGTTTCATCATTGTCTATGATAAGAGGTCAGTGGTGGAGTATGTAAGGAAATACTTGCCAGCATTACACTGGGAAGTTGTGACCATGTATGACGTAGAACTAGGTAAAGATGATGATGATGATGATGATGATGATGATGCAGTGGTTATAATTCAAAAGAAGATGTGGCTCACAAGTGATAGCATCCAGGTCTCAGAATAG 1854 0.4164 MASMARGRADVNSRKKLVITVLVLVIVGAFFYFYSQSSDSSIVEYGDKSLRHFGLKGEKDEGESSSTLVGGEDSAIPKSIPVCDDRLSELIPCLDRNLIYQTRLKLDLSVMEHYERHCPTPERRYNCLIPPPPGYKIPIKWPKSRDQVWKANIPHTHLATEKSDQNWMVVKGEKVVFPGGGTHFHYGADKYIASIANMLNFPNNNINNEGRVRSVLDVGCGVASFGGYLLSSDVIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTLRLPYPSRSFEFAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWREMSALVERMCWKIAAKRNQTVIWVKPPTNSCYLKRSPGTLPPLCQSGDDPDAVSGVKMKACISRYSDQMHKAKGSGLAPWPARLTTPPPRLAEIHYSTKMFEKDVEVWQQRVHNYWSKLGSKIKADTIRNVMDMKANIGSFAAALKDKDVWVMNVVPENEPKSLAIIYDRGLIGAVHNWCEAFSTYPRTYDLLHAWTVFSDIIKKECSSEDLLIEMDRILRPKGFIIVYDKRSVVEYVRKYLPALHWEVVTMYDVELGKDDDDDDDDDDAVVIIQKKMWLTSDSIQVSE* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00376 617 FunFam probable methyltransferase PMT3 187 354 - -
Lapu6g00376 617 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 422 577 IPR029063 -
Lapu6g00376 617 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 22 607 IPR004159 GO:0008168
Lapu6g00376 617 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 89 582 IPR004159 GO:0008168
Lapu6g00376 617 FunFam Probable methyltransferase PMT19 422 585 - -
Lapu6g00376 617 Gene3D Vaccinia Virus protein VP39 206 351 IPR029063 -
Lapu6g00376 617 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 342 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00376 Lapu-Chr6 3755364 3760489 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00376 - - gmx:100805403 1097.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00376 6 3755364 3760489 Lapu6g00376 6 3755364 3760489 ECH
Lapu8g00429 8 20273188 20287240 Lapu6g00376 6 3755364 3760489 PCT