Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02286 ATGAAAGGCAAAGTGAAGAACTCCAAACTGAAGTTGGGCATACCTGCATTTTTCTTCCTCTGCGTCCTTTTCTTCTTTGATTTGGTTGATGTGGGATCAAATTCAAGAATATCGGACAAGAAAGTATATGAACCTCTTGAAGATGGTGAATCCGGGGAATCCTTTATTGATTCAATCCCATTTCAGATTTTAAGTTGGAGACCACGGTTGGTTTATTTTCCAAACTTCACAAGCGTGGAAGCATGTCAGCAAATAATTGAAATGGCAAAGCCAAAACTTGAACCATCAAAACTGGCTTTGCGGAAAGGAGAAACTGCGGAGAGCACGAAAGACACTAGAACAAGGTACCGCACATTTATCAGTGCATCAAGAGACAAATCTGGCATCTTAGACGTGGTAGAGAGGAAAATTGCTAAAGTTACTATGATTCCGAGGAGCCATGGGGAAAAATTCAATGTATTGAAGTATGAGGTTGGCCAGAAATATGATTCTCATTACGATGCGTTCAACCCCGATGAATACGGCGCTGTTAAGAGCCAAAGGATTGCTTCCTTCCTGTTATACCTATCAAATGTTGAAGCAGGAGGAGAGACAATGTTCCCTTATGAGGGTGGTTTGCATATTGGTGCGGATTATGATTACCGAAAATGCATTGGTTTGAAGGTGAAGCCACGGCAGGGCGATGGACTTTTATTTTATTCATTGTTACCAAACGGGAAAATCGATAAGACTTCTCTTCATGGAAGTTGTCCAGTGATCAAGGGAGAAAAATGGGTGGCAACAAAGTGGATTGATGATAAAGAGCAATAG 810 0.4123 MKGKVKNSKLKLGIPAFFFLCVLFFFDLVDVGSNSRISDKKVYEPLEDGESGESFIDSIPFQILSWRPRLVYFPNFTSVEACQQIIEMAKPKLEPSKLALRKGETAESTKDTRTRYRTFISASRDKSGILDVVERKIAKVTMIPRSHGEKFNVLKYEVGQKYDSHYDAFNPDEYGAVKSQRIASFLLYLSNVEAGGETMFPYEGGLHIGADYDYRKCIGLKVKPRQGDGLLFYSLLPNGKIDKTSLHGSCPVIKGEKWVATKWIDDKEQ* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02286 269 FunFam Prolyl 4-hydroxylase 4 60 266 - -
Lapu7g02286 269 Gene3D q2cbj1_9rhob like domain 61 265 - -
Lapu7g02286 269 SMART p4hc 68 265 IPR006620 GO:0005506|GO:0016705|GO:0031418
Lapu7g02286 269 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 145 266 IPR005123 -
Lapu7g02286 269 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 44 263 IPR045054 -
Lapu7g02286 269 Pfam 2OG-Fe(II) oxygenase superfamily 152 264 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02286 Lapu-Chr7 39161327 39164247 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02286 K00472 - gmx:100811068 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02286 7 39161327 39164247 Lapu7g02286 7 39161327 39164247 ECH
Lapu2g00513 2 4388912 4395393 Lapu7g02286 7 39161327 39164247 PCT