Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00513 ATGAAAACCAAAACGGTTAAGGGAAATTGGAGATGGAATTGGAGGACGAACAAGCTCGGCTTGCCTTTCGTCTTCCTCATAGGCATCTTCTTCTTTCTCGCCGGATTCTTTGCTTCCAGTCTCTTTTCTCACTCTCAGGAACGTGACTATGACGTGAGGTTGATGCCGAGAGCGAGGTTAATTGAAAAATCGACGGAGGAGGCAACTGAGTATCATTTGTTGCAAGCTGGAGAATCCGGCGACCATTCCATTATATTGATTCCTTTTCAGGTTTTGAGCTGGTACCCTCGCGCTCTGTATTTTCCTAATTTTGCGAGTGCACAACAATGTGAAAGCATAGTTACAATGGCAAAGGTAGGTCTCAAGCCATCGACATTGGCGTTACGTACGGGTGAAACGGAGGAGAATACAAAGGGAATCAGAACAAGCTATGGTGTTTTTATGAGTGCTTCCGAGGATGAAACGGGGACTCTGTACGCCATTGAGGAGAAAATTGCCAGAGCAACAAAAATTCCTAGGACTCATGGAGAGGCATTTAATATCCTACGCTATGAGGTTGGACAGAAATACAATTCTCATTATGATGCATTTGATTCTGCTGAATATGGCCCACAAAAGAGCCTACGGGTAGCTTCTTTTTTACTGTATTTAACTGATGTTCCAGAAGGTGGGGAAACCATGTTTCCGTTTGAGAATGGATTCAACATGGACGGTAGCTATGATTTCGAGGACTGTATTGGTTTAAAAGTAAAGCCACGCAGAGGGGATGGGCTTCTATTTTACTCATTATTACCTAATGGTACAATTGATCAGACATCACTCCACGGGAGTTGTCCCGTCATTAAAGGAGAGAAGTGGGTGGCAACAAAGTGGATAAGGGATCAAATACAAGACGACGATTAA 903 0.4363 MKTKTVKGNWRWNWRTNKLGLPFVFLIGIFFFLAGFFASSLFSHSQERDYDVRLMPRARLIEKSTEEATEYHLLQAGESGDHSIILIPFQVLSWYPRALYFPNFASAQQCESIVTMAKVGLKPSTLALRTGETEENTKGIRTSYGVFMSASEDETGTLYAIEEKIARATKIPRTHGEAFNILRYEVGQKYNSHYDAFDSAEYGPQKSLRVASFLLYLTDVPEGGETMFPFENGFNMDGSYDFEDCIGLKVKPRRGDGLLFYSLLPNGTIDQTSLHGSCPVIKGEKWVATKWIRDQIQDDD* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00513 300 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 64 293 IPR045054 -
Lapu2g00513 300 FunFam Prolyl 4-hydroxylase 4 88 294 - -
Lapu2g00513 300 SMART p4hc 96 293 IPR006620 GO:0005506|GO:0016705|GO:0031418
Lapu2g00513 300 Pfam 2OG-Fe(II) oxygenase superfamily 180 293 IPR044862 -
Lapu2g00513 300 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 174 294 IPR005123 -
Lapu2g00513 300 Gene3D q2cbj1_9rhob like domain 89 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00513 Lapu-Chr2 4388912 4395393 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00513 K00472 - gmx:100811904 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00513 2 4388912 4395393 Lapu2g00513 2 4388912 4395393 ECH
Lapu2g00513 2 4388912 4395393 Lapu7g02286 7 39161327 39164247 PCT