Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02019 ATGGACGCTCCCCTGCTGGTGAACGGCCAGGGGGCGGCGCTGGTGGCGGAGGACGGCGACTACGTGGCTGCCAGGGGGTTCAACAAGATTAAGGAGGTGTTCTGGATTGAAACGAAGAGGATGTGGCTGATTGCGTTACCCATTGTTTTCAACATATGGTGCCAATTCGGTGTGAACTCTGTCACAAGCATCTTCGTCGGACACCTCGGCGACATTGAGCTCTCTGCCGTCTCTCTCATCAACTCCGTCATTGGCAGTTTCGCCTTTGGTTTCATGCTTGGGATGGGAAGTGCAACAGAGACGCTATGTGGACAAGCTTTCGGAGCTGGGCAGGTTAATATGCTCGGCATTTATATGCAACGCTCATGGGTGATTTTATCTGTGACCAGTATTTTGCTCTTGCCAATATACATTTTTGCTGCTCCAATTTTGAAGCTTCTTGGTCAACAGAAAGATATAGCCGATCTTGCTGGGAATTTCGCTACTTTAGTAATTCCGCAATTTCTTTCACTTGCCTTCAATTTTCCAACGCAAAAGTTCCTTCAAGCTCAGAGTAAGGTAAACGTCATTGCATGGATTGGGTTGGTGGCTTTGGTTCTGCACGTTGGGTTGCTCTGGCTCTTCATTTACACATTAGAGTTAGGCTTAACTGGTGCAGCTTTGGCATTTGATATCACGAGTTGGGGAATTACAGCGGCTCAACTTGTTTATGTTGTGGGTTGGTGTAAGGATGGATGGAATGGATTATCATGGATGGCTTTTAAGGATATTTGGGCCTTTGTTAGGCTCTCTCTTGCATCAGCTGTAATGCTTTGCCTTGAAGTTTGGTATATGATGAGTGTCATAGTTCTTGCTGGCCACCTTGATAGTGCAGTGATTGCTGTTGATTCCCTCTCTATATGCATGAATATCAATGGCTGGGAAGGCATGATCTTCATTGGAATCAATGCAGCTGTCAGCGTCAGAGTTTCCAATGAACTTGGGCTTGGACGTCCAAGAGCTGCCAAGTACTCTGTCTACGTGACAGTCTTCCAGTCACTTCTCTTGGGAATCTTTTTCATGGCTATTATTTTGACGACTAGAGACTATTATGCCCTCATTTTTACTAACAGTCAGGTTTTGCAAGAGGCCGTTTCGAAGCTAGGATTCCTCCTAGCTATTACAATGGTTCTAAACAGTGTTCAACCGGTGATTTCAGGTGTTGCTGTTGGAGGTGGGTGGCAGGCCCTGGTGGCCTACATCAACATAGGATGTTACTACTTATTTGGGCTTCCACTGGGGTTCCTTCTTGGTTATACAGCAAATTTGGGGGTTGAGGGACTTTGGGGTGGCATGATATGCGGAATTCTTCTCCAGACCTTGCTGCTCATGTTGATACTTTACAAAACCAATTGGAAGAAAGAGGTGGAACAAACAAATGCTCGCATGCGGGTATGGGGTGGACAACAAATTGAGGTTGATAAAATTGCTGTTTCTGCATAA 1482 0.4602 MDAPLLVNGQGAALVAEDGDYVAARGFNKIKEVFWIETKRMWLIALPIVFNIWCQFGVNSVTSIFVGHLGDIELSAVSLINSVIGSFAFGFMLGMGSATETLCGQAFGAGQVNMLGIYMQRSWVILSVTSILLLPIYIFAAPILKLLGQQKDIADLAGNFATLVIPQFLSLAFNFPTQKFLQAQSKVNVIAWIGLVALVLHVGLLWLFIYTLELGLTGAALAFDITSWGITAAQLVYVVGWCKDGWNGLSWMAFKDIWAFVRLSLASAVMLCLEVWYMMSVIVLAGHLDSAVIAVDSLSICMNINGWEGMIFIGINAAVSVRVSNELGLGRPRAAKYSVYVTVFQSLLLGIFFMAIILTTRDYYALIFTNSQVLQEAVSKLGFLLAITMVLNSVQPVISGVAVGGGWQALVAYINIGCYYLFGLPLGFLLGYTANLGVEGLWGGMICGILLQTLLLMLILYKTNWKKEVEQTNARMRVWGGQQIEVDKIAVSA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02019 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 30 465 - -
Lapu7g02019 493 NCBIfam MATE family efflux transporter 47 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu7g02019 493 CDD MATE_eukaryotic 37 471 IPR045069 GO:0042910|GO:1990961
Lapu7g02019 493 Pfam MatE 47 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu7g02019 493 Pfam MatE 267 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02019 Lapu-Chr7 36415814 36420465 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02019 K03327 - gmx:100799559 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02019 7 36415814 36420465 Lapu7g02019 7 36415814 36420465 ECH
Lapu4g00649 4 7946671 7949764 Lapu7g02019 7 36415814 36420465 PCT