Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01567 ATGAATTCCTTTCAAGAATTTGACTCCTCGTCAAACTCGGAAACCAAAGCCATCAACCTTGCAGCAGGTGACACCTCCAATTTCACATCACCACCGCCACCCTCATCATCATCACCACCTTCTTCCTCCTCCACCACTCTGAGCCGCTACGAGAACCAAAAGCGGCGCGACTGGAACACGTTCGGGCAGTACCTTCGGAACCACAGACCCCCACTTTCGCTCTCACGCTGCAGCGGCGCGCACGTGCTGGAATTCCTGAGGTACCTCGACCAGTTCGGGAAAACCAAGGTTCACACGCACCTTTGTCCCTTCTTTGGACACCCCAACCCTCCTGCACCTTGTCCTTGCCCTCTACGCCAAGCATGGGGCAGCCTCGACGCTCTCATAGGTCGTCTCAGAGCTGCTTTTGAAGAAAATGGAGGAAAACCTGAAGCTAACCCTTTCGGTGCTCGCGCTGTGAGACTCTACCTTCGTGAAGTGCGTGATTCACAAGCCAAGGCTAGGGGAATTAGCTACGAGAAAAAGAAACGCAAGCGTCCTCAACACCCTCCTCCATTGCCCCCCTCAAATAATGCAAGTTAA 582 0.5361 MNSFQEFDSSSNSETKAINLAAGDTSNFTSPPPPSSSSPPSSSSTTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPQHPPPLPPSNNAS* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01567 193 PANTHER PROTEIN G1-LIKE2 31 181 IPR040222 -
Lapu7g01567 193 MobiDBLite consensus disorder prediction 1 31 - -
Lapu7g01567 193 MobiDBLite consensus disorder prediction 1 52 - -
Lapu7g01567 193 MobiDBLite consensus disorder prediction 163 193 - -
Lapu7g01567 193 Pfam ALOG domain 42 162 IPR006936 -
Lapu7g01567 193 ProSiteProfiles ALOG domain profile. 49 176 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01567 Lapu-Chr7 31174482 31176798 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01567 - - gmx:100806497 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01567 7 31174482 31176798 Lapu7g01567 7 31174482 31176798 ECH
Lapu7g01567 7 31174482 31176798 Lapu6g02009 6 19900500 19901674 ECH
Lapu6g00372 6 3675702 3678761 Lapu7g01567 7 31174482 31176798 ECH
Lapu7g01567 7 31174482 31176798 Lapu6g00372 6 3675702 3678761 ECH