Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lapu6g00372 | ATGGATTCAAATATTCAAGACTTTATAGACACATGTAACTCCGACAACACCTGCAACCTCATCGCCAATAGCACCACCACCCACTTAACCACCAGTGCTACCTCTTCCCCAGCTGCTTCCACCTCCATCACCAGCAGCAGCCGCTACGAGAACCAGAAACGCCGTGACTGGAACACCTTTGGTCAATACCTCAAGAATCACCGACCCCCCCTCTCTCTCTCAAGGTGTAGCGGTGCACATGTCCTTGAATTCCTAAGGTACCTGGATCAATTTGGGAAGACCAAAGTGCATACACCGATCTGCCCCTTTTATGGGCACCCAAACCCTCCAGCACCTTGTCCATGTCCTCTTAGGCAAGCTTGGGGGAGCCTCGACGCTCTGATAGGGCGTTTGCGTGCAGCTTTTGAGGAAAATGGAGGAAAGCCTGAGGCAAACCCTTTTGGAGCTCGAGCTGTGAGACTCTACCTTCGTGAGGTTCGTGATCTGCAGTCCAAAGCAAGAGGAATTAGTTATGAAAAGAAGAAAAGGAAGCGTCCACCACCTCAGCAACAACCCATGCCACTACCTCATCATTCTCTCCCTCCTCCAGGTGCAAGTGCAACTCATTAG | 609 | 0.5107 | MDSNIQDFIDTCNSDNTCNLIANSTTTHLTTSATSSPAASTSITSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQPMPLPHHSLPPPGASATH* | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lapu6g00372 | 202 | PANTHER | PROTEIN G1-LIKE2 | 30 | 182 | IPR040222 | - | |
| Lapu6g00372 | 202 | ProSiteProfiles | ALOG domain profile. | 48 | 175 | IPR006936 | - | |
| Lapu6g00372 | 202 | MobiDBLite | consensus disorder prediction | 166 | 202 | - | - | |
| Lapu6g00372 | 202 | MobiDBLite | consensus disorder prediction | 29 | 48 | - | - | |
| Lapu6g00372 | 202 | MobiDBLite | consensus disorder prediction | 29 | 51 | - | - | |
| Lapu6g00372 | 202 | Pfam | ALOG domain | 43 | 161 | IPR006936 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lapu6g00372 | Lapu-Chr6 | 3675702 | 3678761 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lapu6g00372 | - | - | gmx:100527164 | 340.502 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lapu6g00372 | 6 | 3675702 | 3678761 | Lapu6g00372 | 6 | 3675702 | 3678761 | ECH | |
| Lapu6g00372 | 6 | 3675702 | 3678761 | Lapu6g02009 | 6 | 19900500 | 19901674 | ECH | |
| Lapu6g00372 | 6 | 3675702 | 3678761 | Lapu7g01567 | 7 | 31174482 | 31176798 | ECH | |
| Lapu7g01567 | 7 | 31174482 | 31176798 | Lapu6g00372 | 6 | 3675702 | 3678761 | ECH | |
| Lapu7g00769 | 7 | 9153922 | 9155517 | Lapu6g00372 | 6 | 3675702 | 3678761 | PCT |