Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01327 ATGATATTTGAAAGTTATGGAGTTTTAGAATACTATGAGTCATACATAGGGTCTACAAGTTATCTCCTTAGGCTTTTGGCACACAGAGCACCAGAACAGGTTGAGCCTCAACTGGGTCTTGTGCCTCACACTGACAAGAGCTTCACCACAATTCTTCATCAAAACCATGTCAATGCACTCATGGTGGAGACCAAGAATGGTATCTGGATTCATGTTGATTTCTCTTCATCTTCTTCCTTCGTCGTCATGGCTGGCGATGGACTCATGGCTTGGAGCAATGACAGAATACAGTCTCCAAATCATAAGGTTTTGATGAATGGGAATGAAACAAGGTACTCTCTTGGTCTGTTTGCCTTCTACAAAGGAATTCTGAAAGTACCTGAAGAGCTTATTGATGAAGAACACCCAGTGCAGTATAAACCCTTTGATCATCTTGGATTATTAAACTTCACTTACAGTGCTAATATGAAAGCCTATTGTGGTGTGTGA 489 0.409 MIFESYGVLEYYESYIGSTSYLLRLLAHRAPEQVEPQLGLVPHTDKSFTTILHQNHVNALMVETKNGIWIHVDFSSSSSFVVMAGDGLMAWSNDRIQSPNHKVLMNGNETRYSLGLFAFYKGILKVPEELIDEEHPVQYKPFDHLGLLNFTYSANMKAYCGV* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01327 162 Pfam 2OG-Fe(II) oxygenase superfamily 27 118 IPR044861 -
Lapu7g01327 162 Gene3D - 1 148 IPR027443 -
Lapu7g01327 162 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 19 120 IPR005123 -
Lapu7g01327 162 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 144 - -
Lapu7g01327 162 SUPERFAMILY Clavaminate synthase-like 10 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01327 Lapu-Chr7 28353884 28355611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01327 23 140 Glycosyltransferase AT5G59530 30.952 3.27e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01327 - - gmx:100809268 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01327 7 28353884 28355611 Lapu1g00226 1 9033127 9035255 PCT