Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00226 ATGGGATCTCAAACACAGTCTCAACTTCATGTGGTGGACTTCACTGATGCAACCATGAAGCCTGGCACCGATGCATGGCTCTCAGCCTGCACTCTTGTGAGGACTGCACTTGAAGACAATGGTTGTTTTGTTGCGCGCTATGATAGAATTGGCAAAGAGCTTTGTGATTCTGTTGTATCTGCAATGGAAGACTTGTTTAGTCTCCCACTGGAAATAAAAGCACAAAAAACCAGTGACAAACCTTTCCATGGCTACTTAGGGCAAGTCTCGTGGCTTCCCTTGTATGAGTCTTTGGGCATTGATGATCCTATGACCTTACAAGGCTGCCAAAAATTCACCCACATAATGGGATTGCAGGGGAATCATCGTTTCTGTGAAAGCATGTGCGAGTATTCTAAGTTGTTGGGAGAAATAGACCATATGGCAAAGAGAATGGTGTTTGAGAGCTATGGTGTGGACATGGAAGGATGCGAGTGCATGATAGAATCAAGCGATTATCTGCTTCGATGCATGAAATATAGGAGAGCTGAGAGGGATGAAAAGGATTTGGGAATGCATTCTCACACAGACTTGACCATCCTATCCATAGTTCATCAGCTCAATAATCTCAATGGCTTGGAAATCAAACTCAAGGATGGAGAATGGATTGGGGTTGATGCCTCTTCCTCCCTGTTTGTCGTCATGGCCGGTGACGCATTCAATGTGTGGAGTAATGGTAGAATACGACCATGTGAACACAGAGTTACCATGAAAGCAACGGAAACCAGATACTCTATGGGGCTGTTTTCTTTTAGTAGTGATAAGGCTATGCAGATACCAGATGAGCTAGTTAATGAGCAACATCCCTTGCGTTATAAATCAATATTCGACCATTATGAATACCTTCGTTTCTATGAGAAAGAGAAAATCAAAGATTCTTATTCTCGAATCAAAGCCTACTGTGGAATCTCATCCGTATACTAA 963 0.4289 MGSQTQSQLHVVDFTDATMKPGTDAWLSACTLVRTALEDNGCFVARYDRIGKELCDSVVSAMEDLFSLPLEIKAQKTSDKPFHGYLGQVSWLPLYESLGIDDPMTLQGCQKFTHIMGLQGNHRFCESMCEYSKLLGEIDHMAKRMVFESYGVDMEGCECMIESSDYLLRCMKYRRAERDEKDLGMHSHTDLTILSIVHQLNNLNGLEIKLKDGEWIGVDASSSLFVVMAGDAFNVWSNGRIRPCEHRVTMKATETRYSMGLFSFSSDKAMQIPDELVNEQHPLRYKSIFDHYEYLRFYEKEKIKDSYSRIKAYCGISSVY* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00226 320 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 296 - -
Lapu1g00226 320 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 85 IPR026992 -
Lapu1g00226 320 Gene3D - 1 304 IPR027443 -
Lapu1g00226 320 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 303 - -
Lapu1g00226 320 Pfam 2OG-Fe(II) oxygenase superfamily 173 264 IPR044861 -
Lapu1g00226 320 SUPERFAMILY Clavaminate synthase-like 7 304 - -
Lapu1g00226 320 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 265 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00226 Lapu-Chr1 9033127 9035255 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00226 126 286 Glycosyltransferase AT5G59530 27.273 2.22e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00226 - - gmx:100775440 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01327 7 28353884 28355611 Lapu1g00226 1 9033127 9035255 PCT