Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01122 ATGGAGGTTGGGGAAATGAATAGAAAGGAGCCACAAGTTGAGGTTCCTTTGGTCCCCGCCACCCCCATTAAGCCCGTTCCTCTAAAACCAGTGCCGATCTACACGCCTGGGGAGATACACCAAATGGGTTATCATGCAAATGGAGCAGTTGCATGTGTTGAATTTTCAATTGGCCAAGAGAAATTTTGCAGGTCGGATGTTGGGTCAAACGTCGCAGGTGACAGTGGCAAAACTTGTGAACATACAGCTTCGGATGCTGCTTCCAGCTTCAGCAAACTCGGGTTTTGTGAGCATTTGTTCGCAGTTGAGGCTGAATCGAGGAACTCTAGTGCGACTCAAGGGAATAATGATAGATTGAACAATCCATTTGTTCCTTCATTCATCCTTGACAATGTCCGAGACCCTCAGGAAACATACATTGCTTGCTGTAGCAACAGAACTTCGCAGGATTTCCCATTTACACTTGACAATGCCAACAACGAAAACAGACAAATAGCATCAACGCAAATCGATATGGAAGAAAATGATCCTGGAGGGGAAGAGAGAAACGGCCCTGCCAGTAAGCTTGACAGTAATGCACTGCCAAACAGCAAAGAACTCTGTGACCCTGTCATGGAATTTGCTGCTATTTCTTCACCATTCAAGGAGAATCACAATCAAGATAAGGGAAGCAATCTTGATACTGATCTTAACAAAACACCACAACAAAAACCAAGGAGAAGAAAGCACCGTCCCAAGGTCATCAAAGAAGACAAACCCAGAAAAACTCAGAAGCCTGTTATCCCGAAGCCTGTTCAATCAAAAGAAAACCCAACTGTCAAGAGGAAGTATGTGAGAAAGAATGCATTGACCAAGACTTCTAGTCCTCCAACAGAAGTGACTAGAGAATTGACAAAAGAAATGCCTGAATCTGCCAAAATGTCTTGTAGAAGGGTCATAGATTTTGACGTGGGATCAAGAGAAGAAAGTTCTGCTGGAAGAGAAAACACAACTGCACTATTGGGAAAAGGAAATGGTGTGCTCGTGCAAGAAACAAATGTAGTCCTTGCCGATGATCTAAACACTTCCGTGAAGCAGGCATCAATCTGTTACACTTCAGTACCAGAAGACACACATTCCCTAAATACATTTCCTTTGGGAAGAAAAGACTCAGGGACAAAGCCAGAGGAAAAGCCAGCTGCTAAGAGGAAGTATATGAAAAGGAATGGAGTGAACATGACTTCTGCTCCTGATGCAGAAATGACTAAAGAAGAGATGCCCCAATCCACCCAAATGTCATGTACAGAGTTCATAACTTTTGATGAAAGAGCAAGAGATCAAAGTTGTGCTGTCGAAGAGAATGCAACAGTATATCCTGGTCGTGAAATTGGTGTAGTCAGGCAGGAAATGAATGTAGGCCTTGCCAACCACCTAAACACTTCCATTAAGCAGCCATCAAATGGTTGCATGTCATTATCAGAAGACTCACAAGCACCAAATACATCTTCAGGAAGAAAAAGCTTTTTCACAGAACCAGAGGAAAACTCAGCTGTCAATAAGAAGAATACAAGAAGGAAAAAGGTGAACGAGACTTCTCCAACAGATGGTACTGGAGAAATGACTACAGAAGTTGTGCCTGAATCAGCCCAAATACCATATACAGGGTCTGTAAAATTTTATGTGAGAGCAAGAGATGAAAGTCGTGCAATTCAAGAGAATCCAATTGTCATTCCAGGCAGTGAAATTGGTGTAATAATGGAGGATATTAATGTCGGCTTTTCCTATGATCTAAACAATGCCATGAAGCTGGCATCAAACAGCTACATGTCATTACCAGAAGACACACAAGCCACAAATACATCTTCAAGAAAAAAAAGATCTCGAACAAAGCCAGAGGAAAACCCAACTGCCAAGAGGAAGTATGTGAGAAAGAAAGGAGTGAAGACATCTGCTCCTCTTATAGAAGTACCTGGAGAATTGACTAGAGAAAAGATTTCTGCATCTGCCCAAACATCATGCAGAGATTCCACAAGTTTTGATGAAAGAGCAAGACAAAAAAGTTATGCAGTCCAAGAGAATCTAAGTGGATATCCAGGCAGTGAAATTGGTATAGTCAGGCAGGAAATGAATGTTAGCCTTGCCTATGATTTAAACACTTCCACAAAGCAGACATTAAATGAAGATGTGGCATTACTTAAGGACACACAAGCCCAAGGTTCATCTTCGAAAAACAATCTCCCTGGGACAATGACAAAAGAAAACCTGACCAGCAAGAGAAAGAATGTGAGGAAAAAAGTATTGAATCTGTCTCCTATTCCTTCAACAGAAATGACTGGATTGACTGAAGCAGTCATACTTGAATCTAACAACATGTCATGGAGAAGGTCCAATGTTGATGTGGGAACTAGAAATGTAAGGTCTGTAGGGAGAGAAAATTTAGATTTGCACATTGGGAAGGAAAATACAGTGTTAGAGGAAACAAAAGTAGGTCTCACCTATAATCAAGACACTTGGATGAATGCAACATTAAATAATTGCATGCCAATACCTGAGGGAACACAACACCCAAGTATGTTGTCTATTTCGAAATACATCCCCCTTGGGAAAATGCTGAATGCCAACTCTGTAGAGAGCAAAAACAAAGGCCAGGCAACTACTCCGGATGGAAACATCAGTAATAATCAAAGTTCAACAATAAGGTTACAAATGGTTGGTACAAGGAGAAAATATTCTGGTAGCGTTAGTCATGCTGATAACAGCAACATGAATCTGATTGGAGCACACTATAATGGATTGCCATCATACCACACTAACTTTTGCCCTCAGTTTGCTAACATACAGAAGAAAAGGAGAACTGAAAAGGGGAAAGCTTCTTATACATATGTTAGATCTATGACCGCAACAAAAGAAGTCCAGCAGACATACCCTCAGGAAGATGCTCTAGGACATCCTTATGCAACAAGTTCTGGCTGCTGTGTGTATGGATATGGACATGATACAACTGGAGTCCCAGTCACAAGTGAATTAACAGAAAATTTTATTGATAATAGTCAAACATTTGATGAGTTTATGCTGTCTTTGAAAAGGCTGACAGAAATGTCTCAAACCTCTAATTGTGATTCTGGTTCTCCAACCAGAATTAGAAACTCTGATACTGGACCAAATTATACTACAAAACAAGTAGGGATCGCTTGCAGAGAAACATTTGGGGATGCAAAAAGACCACAAACATGCATTGGTGCTTTAGGCGCAGATACACATACATCACTTCCAAAAAAGAAGCGGAATAGAAAGAAAAATGTCCTTTCCAGTTCAGCACATTCTAGCTCAAACAAGATGCTACAGCACCTTAGTTTTACATTGGGAAATAACCCTCTGTCAGTGGGGAAGTCATCAGATGTTGCTTCTGAAGTACTGTGGAAAACCGTGGACTATATTGATGCATTAGCATTGCAGTTTAGACGACTAAACATAAACACAGAAGCCAGAGACCTTGCATTTCATGAGCAGAATGCACTTGTTCTGTATAAACAGAAAAATCAAAAGCAAAGCACCCTTATTCGGGGAGATGGGGCCATTGTTCCCTTTCAAATCAAGAAACAGCATCTACGACCAAAGGTTGACCTTGATGATGAGACTGATAGAGTGTGGAAGCTTTTGTTGCTTGATATAAACAGTCCTGGAATTGACGGAACAGATGAAGATAAGGCCAAATGGTGGGAAGAAGAGCGCAATGTGTTCCGAGGACGAGCAGACTCATTTATTGCACGGATGCATCTTGTACAAGGAGACAGACGATTTTCTCGATGGAAAGGATCAGTTGTGGATTCAGTGGTTGGAGTTTTCCTCACCCAAAATGTCTCTGACCATCTTTCCAGCTCTGCATTCATGTCCCTTGCTGCTCGATTTCCAAAAAATTTGGGCAGCATGTCCAAAGCACACCATGCAGAAGACACAAGGCTGGTAGAAGAACCACAAGTGCATGTAGTGGAACCAGAAGAGGGCACTGAATGGAATGTAAAACTGTTGAATCAACCAGTTTATGACCAGAGTTCTTTGACAATAGATCTAGTCCAGCTTTCAGGAGAAAAAGAAGTCATCAACAGCAATGTAATTAGCTTGTCAGATGAAATAAACTCCAAATTGTCAGAATCATCTCGACAAAATATTAAGGAACACTGTAGTCCAATGGGGAGTGGACTATATTGTTCCACAATTGAGAAAGGAGAAGAAAAATCATGTTATGATGGTGATAGGAAAGAGTTGATTGACATAGTTTCATCCCAAGGCTCTGTCATTTCATCTCAAATTTCTGGAGATTTTTCTAATGATCAAAATCCTGAGAAAATAGGATCATGCTCAGATAGCAACTCGGAAGTAGAAGTTCTGTCCAACACAGCAAAGTACAACCATTTTGATAGTAACACATCCTTCAGTAAACTCCTCGAAATGGTTAGTTCAACCAAGTTTTATGAAGATAACAATCAGAAAAGCAAATCAAATGAGAACTCAAGAGATGCATATAATCAACCTTTATGCAGGCAGCATGACAACCCAATAGAAAGCTTGCAAAAATCAAGTGTTACTCAAGGCTCTTCAGAAGCATCCATCAACCTATCCCATGACTGCACTGATCCTTTCAAAACCAAATCATCTAGTAACTTCTCAAAGAAAAAGGATGAAAGTGGCATGAACAGATCTAGTTTTCAAACAGAACCTGCAGGCCAAGTTGCAATTACTCTTTCTCAAACTATTGTGCCTCAAGTCCATCCTCAGGAACAAAACAATAACCAGCAGCAAAGCCTTTTCAATACCAACATCCCTGGACAAACTCAAGATCTTATGCAGAAAGAAAGGGGATCTGATCTTGGCAAGCACAAAAATGCCATGGGGAATGGAACCAATGACATAAGTTCTGCCCCGATAAAGGTAAAGAGCAAGGAACAAGGAAAAGATAAAAAGGATGATTTTAACTGGGATAGTTTAAGAATAGAAGCACAAGCTAAGGTTGGGAAAAGGGAAAAGACAGAAAACACTATGGATTCTTTGGATTGGGATGCTGTGAGATGTGTAGATGTCAATGAAATTGCCAAGACCATTAAAGAACGGGGTATGAACAACAGGCTTGCAGAACGTATTCAGAATTTCCTGAATCGACTGGTTGAAGAACATGGAAGCATTGACCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAAAGAATACTTGCTCAGCATAAAAGGATTGGGATTGAAAAGTGTGGAATGTGTGCGGCTTTTAACACTGCACCATCTTGCCTTCCCGGTAGACACAAATGTTGGACGTATAGCAGTACGACTGGGGTGGGTCCCTCTGCAGCCACTGCCTGAATCACTGCAGTTGCATCTCCTAGAATTGTACCCCGTGTTGGAATCAATACAAAAATATCTCTGGCCTCGACTGTGCAAGCTAGATCAAAAAACACTATATGAGCTACATTATCAGATGATTACATTTGGAAAGGTCTTCTGTACGAAAAGCAAACCAAATTGTAATGCATGTCCAATGAGAGGAGAATGTAGACATTTTGCTAGTGCATTTGCAAGTGCAAGGCTTGCACTGCCTGAACCAGAGCAGAAGAGTATAGTTAGCACAGCAGGAAATAGTGTGATTGACCAGAAGCCAACTGAAATCATCAGTCAGTTGCACTTGCTTCCCCCTGAGAACACAACCCAAGCAGAAGAAATTCAACTAACAGAAGTGAGCAGGCCACTGGAATCAAAATCTGAAATAAATATTTGTCAGCCCATCATTGAAGAGCCAACAACTCCAGAGCCAGAATGCTCCCATGTATCACAAACTGATATAGAGGATGCTTTCTATGAGGATTCATGTGAAATTCCTACCATCAAGCTTAACATAGAAGAGTTCACTCTGAATTTACAAAATTACATGCAAGAAAAGATGGAACTTCAAGAAGGTGAAATGTCGAAGGCATTGATTGCTTTGAATCCAGAAGCTGCTTCAATTCCTATGCCCAAGCTAAAGAATGTGAGCCGATTACGAACAGAGCACTGTGTTTATGAACTCCCAGATACACATCCTCTTCTGCAAGGGTGGGACACACGTGAGCCTGATGATCCAGGCAAATACCTTCTTGCTATATGGACTCCAGGCGAAACAGCAAATTCTATACAGCCACCAGAAAGCAAATGCAGCTCCCAAGAAGAATATGGCCAACTCTGTAATGAGAAGGAATGTTTTTCATGTAGCAGTTTCCGAGAAGCTAATTCACAGATAGTTAGAGGGACACTCCTGATACCATGCCGAACAGCTATGCTGGGAAGCTTTCCACTAAATGGCACCTACTTCCAAGTCAATGAGGTATTTGCTGACCATGAGTCAAGTCTTAACCCAATTAGTGTGCCCCGAAGTTGGATCTGGAACCTAAACAGACGAACAGTATATTTTGGAACCTCCGTACCAACAATATTTAAAGGTTTAACAACTCAAGAAATTCAACAATGCTTTTGGAGAGGTTATGTCTGCGTGCGGGGATTTGACAGGGAAACACGAGCACCCCGTCCTCTGATGGCTAGACTACATTTCCCAGCTAGCAAGTTGGCTGCTAATACCAAAGAGAAGAGAGAAAAGAAGTCGAGTTCCGCAAAATCACGAGGACTGAATTCAAATGCGCCGGAATTGATTTCTAACAGTAGCAACATTTGA 6690 0.4135 MEVGEMNRKEPQVEVPLVPATPIKPVPLKPVPIYTPGEIHQMGYHANGAVACVEFSIGQEKFCRSDVGSNVAGDSGKTCEHTASDAASSFSKLGFCEHLFAVEAESRNSSATQGNNDRLNNPFVPSFILDNVRDPQETYIACCSNRTSQDFPFTLDNANNENRQIASTQIDMEENDPGGEERNGPASKLDSNALPNSKELCDPVMEFAAISSPFKENHNQDKGSNLDTDLNKTPQQKPRRRKHRPKVIKEDKPRKTQKPVIPKPVQSKENPTVKRKYVRKNALTKTSSPPTEVTRELTKEMPESAKMSCRRVIDFDVGSREESSAGRENTTALLGKGNGVLVQETNVVLADDLNTSVKQASICYTSVPEDTHSLNTFPLGRKDSGTKPEEKPAAKRKYMKRNGVNMTSAPDAEMTKEEMPQSTQMSCTEFITFDERARDQSCAVEENATVYPGREIGVVRQEMNVGLANHLNTSIKQPSNGCMSLSEDSQAPNTSSGRKSFFTEPEENSAVNKKNTRRKKVNETSPTDGTGEMTTEVVPESAQIPYTGSVKFYVRARDESRAIQENPIVIPGSEIGVIMEDINVGFSYDLNNAMKLASNSYMSLPEDTQATNTSSRKKRSRTKPEENPTAKRKYVRKKGVKTSAPLIEVPGELTREKISASAQTSCRDSTSFDERARQKSYAVQENLSGYPGSEIGIVRQEMNVSLAYDLNTSTKQTLNEDVALLKDTQAQGSSSKNNLPGTMTKENLTSKRKNVRKKVLNLSPIPSTEMTGLTEAVILESNNMSWRRSNVDVGTRNVRSVGRENLDLHIGKENTVLEETKVGLTYNQDTWMNATLNNCMPIPEGTQHPSMLSISKYIPLGKMLNANSVESKNKGQATTPDGNISNNQSSTIRLQMVGTRRKYSGSVSHADNSNMNLIGAHYNGLPSYHTNFCPQFANIQKKRRTEKGKASYTYVRSMTATKEVQQTYPQEDALGHPYATSSGCCVYGYGHDTTGVPVTSELTENFIDNSQTFDEFMLSLKRLTEMSQTSNCDSGSPTRIRNSDTGPNYTTKQVGIACRETFGDAKRPQTCIGALGADTHTSLPKKKRNRKKNVLSSSAHSSSNKMLQHLSFTLGNNPLSVGKSSDVASEVLWKTVDYIDALALQFRRLNINTEARDLAFHEQNALVLYKQKNQKQSTLIRGDGAIVPFQIKKQHLRPKVDLDDETDRVWKLLLLDINSPGIDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPKNLGSMSKAHHAEDTRLVEEPQVHVVEPEEGTEWNVKLLNQPVYDQSSLTIDLVQLSGEKEVINSNVISLSDEINSKLSESSRQNIKEHCSPMGSGLYCSTIEKGEEKSCYDGDRKELIDIVSSQGSVISSQISGDFSNDQNPEKIGSCSDSNSEVEVLSNTAKYNHFDSNTSFSKLLEMVSSTKFYEDNNQKSKSNENSRDAYNQPLCRQHDNPIESLQKSSVTQGSSEASINLSHDCTDPFKTKSSSNFSKKKDESGMNRSSFQTEPAGQVAITLSQTIVPQVHPQEQNNNQQQSLFNTNIPGQTQDLMQKERGSDLGKHKNAMGNGTNDISSAPIKVKSKEQGKDKKDDFNWDSLRIEAQAKVGKREKTENTMDSLDWDAVRCVDVNEIAKTIKERGMNNRLAERIQNFLNRLVEEHGSIDLEWLRDVPPDKAKEYLLSIKGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPEPEQKSIVSTAGNSVIDQKPTEIISQLHLLPPENTTQAEEIQLTEVSRPLESKSEINICQPIIEEPTTPEPECSHVSQTDIEDAFYEDSCEIPTIKLNIEEFTLNLQNYMQEKMELQEGEMSKALIALNPEAASIPMPKLKNVSRLRTEHCVYELPDTHPLLQGWDTREPDDPGKYLLAIWTPGETANSIQPPESKCSSQEEYGQLCNEKECFSCSSFREANSQIVRGTLLIPCRTAMLGSFPLNGTYFQVNEVFADHESSLNPISVPRSWIWNLNRRTVYFGTSVPTIFKGLTTQEIQQCFWRGYVCVRGFDRETRAPRPLMARLHFPASKLAANTKEKREKKSSSAKSRGLNSNAPELISNSSNI* 2230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 612 633 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 1485 1565 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 1429 1450 - -
Lapu7g01122 2229 Gene3D Hypothetical protein; domain 2 1673 1758 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 170 197 - -
Lapu7g01122 2229 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 141 329 IPR044811 GO:0019104|GO:0035514|GO:0080111
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 1081 1102 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 2197 2229 - -
Lapu7g01122 2229 SUPERFAMILY DNA-glycosylase 1242 1852 IPR011257 GO:0003824|GO:0006281
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 728 754 - -
Lapu7g01122 2229 SMART endo3end 1657 1829 IPR003265 GO:0006284
Lapu7g01122 2229 Gene3D - 1759 1847 IPR023170 -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 478 533 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 510 525 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 604 638 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 728 748 - -
Lapu7g01122 2229 FunFam DNA glycosylase/AP lyase ROS1 1751 1859 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 215 304 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 1494 1544 - -
Lapu7g01122 2229 Coils Coil 1961 1981 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 374 396 - -
Lapu7g01122 2229 Coils Coil 155 175 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 1615 1648 - -
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 1027 1050 - -
Lapu7g01122 2229 Pfam Permuted single zf-CXXC unit 2055 2087 IPR028924 -
Lapu7g01122 2229 SMART ccc3 1830 1850 IPR003651 GO:0051539
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 478 509 - -
Lapu7g01122 2229 CDD ENDO3c 1677 1795 IPR003265 GO:0006284
Lapu7g01122 2229 MobiDBLite consensus disorder prediction 2211 2229 - -
Lapu7g01122 2229 Pfam RRM in Demeter 2090 2190 IPR028925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01122 Lapu-Chr7 22723805 22737208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01122 - - pvu:PHAVU_007G223600g 3562.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01122 7 22723805 22737208 Lapu7g01122 7 22723805 22737208 ECH
Lapu6g00605 6 6287477 6291359 Lapu7g01122 7 22723805 22737208 PCT