Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00605 ATGGATTTTGGAGAATCACAGAGAAGGAAGCTCGAAGAGCAGTCTCTTCGGGTCCCCATCCCCGCCACCACTGCCACCCTTACCACCCCTCTGGAGCCCGTGGTTCCGAGACCAGAGGCAGAGCCGATCTGGACTCCTGGGATGGCAAACCAGCTGTATTCTCATTCCAATGGGATACCTGCTGGCTTTGATCCCTCGCCATGTCCAGAGATAAACAACTGGTCTCACCACCGCTCAGAACCTGTCGCCGCTTTCACCTATCACAATGTACCCATATCTTTTCCAGACTTTCCCAGTTCAAGTAACGCCATTGCTCAACTTTTGACTCTGGCAGACACTCCATTGCCATATTCTAATGTAACAAATGAAGAGCTTTTGAGCCAATTTATCCCTCCCTATAATTCACAGTTCAATCCCACATATACATCTTTCGATCATCATCAACTTCTGTCTCTGGAGCAACCATTTCTGAATACTGTCCATAACCAGTATCAAGATCTTCCTGGCTCCTCACACTTTGGTTGCTGTAGCAAGACATTTCCTCAAGTTGAAGCACACGCAGGTGATGCCATTGATGCAGAAACCAGACAAAAAGCAGTGGCACCAATAACCTTTGAAGAAAGGAAGGAGGAAGTGAAAAATGCTCCAGCCACAAAGTGCTACAATACTAACAGCAAAATTTACGACCCAACTAATGAAATAGCTGCTGTATCTGCACCCCGCAAGGAGAATCACAACCATAAAATGAAAACAAGCCTTGATTTTGATCTGAATAAAACCCCTCAATCAAAAACCACAAGAAGAAAGCACCGCCCAAAGGTCATAAAAGAAGACGAACCAAAAAGAACTACCAAGAAAGTCACAGCAGAGTCTGGTCAGCCAAAAGAAAACCCAACTAAAAAGAGAAAGACCAGACTGAACACAGCTTCTACTCAAACCGAAGAGACTGGAGAATGGAATAAACCATTGACGCGTGAATCCGCAAAAAAGACATCTAGAAAGTCCTTAAATTTCGAGACCAGCGAACAAGCAAATTCCCTTGGGACCAAGCCAAATCTCAACAACAGCAGCAGCTCAAGGAATTGGATGGCTGATCATGATGGACTTCAAGAGTGTGGATTGCAAGCAGTTGGTTCAAAGAGAAAACAACCAGGTAAACAAGCAGATAATAGCACTAATCTGGTAGGAGCACGACATAATGGTTTGCAGGTGGTCTGCCTGGACAATGCGGTTCAATTTCCAAATGTTCAGAAGAAAAGGAGAAGTGAAAAGGGGAGAATTTCAAAGACATCCCGTAAATCTTCTTTTAGTACTCCTCAATCCCTTGAGTACACCTTATCTTTAGGGCAGAGGAGGCCGACCAAAAGAAGAACAAGAGCTTCCCCGAGAACTCATGCCAGTCCAGCAGATACTGCAAAGCAAATATTGGGGGATGCAGAAAGACCACAGACATGCATTGATGCTTTAGTTGCAGATATGCGAGCATCCCTCACAAAAAAGAAACGAACAAAGAGAAGGACTCCGGTCAATTCAGCGTATACCTGCAAAAATGAAATGCAACAAGGAAAATGGAAAAACATACACACTGTGGACGCTTTAACAGAGCAATTTAGATTCCTAAACATAGACGGAGAAACCCAAGAGCTTGAATCGCATGGGCAGAATATGCTTGTTCCTTATAACCAGCAAAATGGCACCATTGTTCCCTACAAAGGGGATCTCACAAAAAAAAAGGGCCAACGACCTAAAGTTGATCTTGATGAAGAGACTACAAGGGTTTGGAATCTTCTACTTGCGGATATTAACAGTAGTGGGGTTGATGGAAGTGATGCAGACAAAGCCAAAAAGTGGGAAAGAGAACGAGAAGTGTTTCGTGGCCGAGCAGACTCATTTATTGCAAGGATGCATCTAGTACAAGGAGACAGGGGCTTTTCTAAGTGGAAGGGATCTGTTGTGGATTCTGTGGTTGGAGTTTTCCTCACTCAAAATGTCTCAGACCATCTTTCCAGGTATAAATCATGCAAGCATAACTACTGA 2037 0.4413 MDFGESQRRKLEEQSLRVPIPATTATLTTPLEPVVPRPEAEPIWTPGMANQLYSHSNGIPAGFDPSPCPEINNWSHHRSEPVAAFTYHNVPISFPDFPSSSNAIAQLLTLADTPLPYSNVTNEELLSQFIPPYNSQFNPTYTSFDHHQLLSLEQPFLNTVHNQYQDLPGSSHFGCCSKTFPQVEAHAGDAIDAETRQKAVAPITFEERKEEVKNAPATKCYNTNSKIYDPTNEIAAVSAPRKENHNHKMKTSLDFDLNKTPQSKTTRRKHRPKVIKEDEPKRTTKKVTAESGQPKENPTKKRKTRLNTASTQTEETGEWNKPLTRESAKKTSRKSLNFETSEQANSLGTKPNLNNSSSSRNWMADHDGLQECGLQAVGSKRKQPGKQADNSTNLVGARHNGLQVVCLDNAVQFPNVQKKRRSEKGRISKTSRKSSFSTPQSLEYTLSLGQRRPTKRRTRASPRTHASPADTAKQILGDAERPQTCIDALVADMRASLTKKKRTKRRTPVNSAYTCKNEMQQGKWKNIHTVDALTEQFRFLNIDGETQELESHGQNMLVPYNQQNGTIVPYKGDLTKKKGQRPKVDLDEETTRVWNLLLADINSSGVDGSDADKAKKWEREREVFRGRADSFIARMHLVQGDRGFSKWKGSVVDSVVGVFLTQNVSDHLSRYKSCKHNY* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00605 678 MobiDBLite consensus disorder prediction 272 303 - -
Lapu6g00605 678 MobiDBLite consensus disorder prediction 239 364 - -
Lapu6g00605 678 MobiDBLite consensus disorder prediction 240 254 - -
Lapu6g00605 678 MobiDBLite consensus disorder prediction 337 364 - -
Lapu6g00605 678 MobiDBLite consensus disorder prediction 304 318 - -
Lapu6g00605 678 MobiDBLite consensus disorder prediction 319 336 - -
Lapu6g00605 678 MobiDBLite consensus disorder prediction 416 478 - -
Lapu6g00605 678 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 213 669 IPR044811 GO:0019104|GO:0035514|GO:0080111
Lapu6g00605 678 MobiDBLite consensus disorder prediction 431 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00605 Lapu-Chr6 6287477 6291359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00605 - - pvu:PHAVU_001G186500g 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00605 6 6287477 6291359 Lapu6g00605 6 6287477 6291359 ECH
Lapu6g00605 6 6287477 6291359 Lapu7g01122 7 22723805 22737208 PCT