Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01113 ATGCCTTCTAGTCACTTACTTCTCGAGGAACCCATTAGGATGGTCTCCATCCTTGAGCCCTCCAAGCCTAGTTTTTTCCCCGCAATGACAAAGATTGTTGGTACTCTGGGTCCTAATTCTAGATCCGTTGAAATTATTTCTAATTGTCTCAAGGCTGGCATGTCTGTGTCTCGATTTGACTTTTCGTGGCATGACCCTGAGTATCATCAGGAGACTTTAGAAAATTTGAAGGTTGCTATCAAGAGTACTAAGAAGCTCTGTGCTGTTATGCTGGACACGGTGGGTGCAGAGATGCAGGTTGTTAACAAAAGTGAGAAAGCTATCTCGCTTGAGGCAAATGGTCAGGTTGTTCTAACTCCTGATGGTGGACAAGAAGCTTCTTCTGGAATATTGCCAATCAATTTTGATGGGCTGGCTAAGGCTGTCAAGACGGGAGACACTATTTTTATTGGTCAATACTTGTTCACAGGAAGTGAAACTACTTCTGTGTGGCTAGAGGTATCTGAAGTCAAAGGGCAAGATGTTGTTTGCATTATAAAGAATTCGGCTACATTGGCCGGGCCACTTTTCACTTTGCATGGCTCTCAAATTCACATTGATTTGCCTACTCTCACTGAGAAAGACAAGGAGGTTATAAGCACTTGGGGAGTTAAAAACAAAATTGATTTTCTGTCATTGTCATATACTCGACATGCTGAAGATGTTCGCCAGGCACGTGAATTCCTTTCAAAGTTAGGTGATATCAGCCAGACTCAAATTTTTGCAAAGATTGAAAATGTTGAGGGATTGACCCATTTTGATGAGATTCTACAAGAAGCCGATGGAATTATCCTTTCGCGAGGAAATTTGGGTATTGATCTTCCACCAGAGAAGGTGTTTTTATTTCAAAAATCTGCCCTTTACAAGTGTAATATGGCTGGGAAACCTGCTGTGCTTACACGTGTTGTGGATAGCATGACTGACAACTTGAGACCAACTCGTGCTGAAGCTACTGATGTTGCCAACGCTGTTTTAGATGGAAGTGATGCTATACTTCTGGGTGCTGAGACTTTACGTGGGTTGTACCCTGTTGAGACCATATCTACTGTTGGCAGAATTTGTTCAGAGGCTGAGAAAGTTTTCAATCAAGACCTTTATTTTAAGAAGACTGTCAAGTATGTTGGAGAGCCCATGTCCCACTTGGAATCTATTGCATCCTCTGCGGTACGAGCTGCAATTAAGGTGAAGGCGTCTATTATAATTTGTTTCACTTCATCTGGAAGGGCTGCAAGATTGATTGCTAAATATAGGCCGACAATGCCAGTTCTATCTGTTGTGATACCCCGACTAAAGACAAATCAACTAAAGTGGAGCTTTAGCGGAGCTTTTGAGGTCCAACTGCCAACTTTGTTCTTCATAAGGTTTACATCTAATGCAAGACAATCACTTATTGTGAGGGGTCTATTTCCTATGCTCGCAGATCCTCGACATCCTGCTGAGTCAACAAGTGCAACAAATGAGTCTATACTTAAGGTTGCCCTTGATCATGGAAAAGCATTAGGAGTTATAAAGTCACACGATCGGGTAGTTGTTTGTCAGAAACTTGGTGATGCATCTGTGGTTAAGATTATTGAGCTTGAAGATTAA 1626 0.4194 MPSSHLLLEEPIRMVSILEPSKPSFFPAMTKIVGTLGPNSRSVEIISNCLKAGMSVSRFDFSWHDPEYHQETLENLKVAIKSTKKLCAVMLDTVGAEMQVVNKSEKAISLEANGQVVLTPDGGQEASSGILPINFDGLAKAVKTGDTIFIGQYLFTGSETTSVWLEVSEVKGQDVVCIIKNSATLAGPLFTLHGSQIHIDLPTLTEKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLSKLGDISQTQIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGRICSEAEKVFNQDLYFKKTVKYVGEPMSHLESIASSAVRAAIKVKASIIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEVQLPTLFFIRFTSNARQSLIVRGLFPMLADPRHPAESTSATNESILKVALDHGKALGVIKSHDRVVVCQKLGDASVVKIIELED* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01113 541 Pfam Pyruvate kinase, alpha/beta domain 395 536 IPR015795 -
Lapu7g01113 541 PANTHER PYRUVATE KINASE 28 525 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu7g01113 541 Gene3D - 363 539 IPR036918 -
Lapu7g01113 541 FunFam Pyruvate kinase 96 202 - -
Lapu7g01113 541 Gene3D - 30 362 IPR040442 -
Lapu7g01113 541 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Lapu7g01113 541 NCBIfam pyruvate kinase 30 440 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu7g01113 541 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu7g01113 541 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu7g01113 541 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu7g01113 541 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu7g01113 541 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu7g01113 541 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu7g01113 541 FunFam Pyruvate kinase 371 527 - -
Lapu7g01113 541 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 375 IPR015813 GO:0003824
Lapu7g01113 541 SUPERFAMILY PK C-terminal domain-like 358 529 IPR036918 -
Lapu7g01113 541 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Lapu7g01113 541 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01113 Lapu-Chr7 22402919 22412191 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01113 K00873 - gmx:100802271 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01113 7 22402919 22412191 Lapu7g01113 7 22402919 22412191 ECH
Lapu6g00590 6 6139289 6147704 Lapu7g01113 7 22402919 22412191 PCT