Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00590 ATGCATTCCAGTCACTTACTTCTCGAGGAACCCATTCGTATGGTTTCCATTCTCGAACCATCCAAGGCCAGTTTCTTTCCCGCAATGACGAAGATCGTTGGTACTCTCGGTCCCAAATCTCGATCGGTGGAGGTTATTTCTGCTTGCCTTAAAGCTGGAATGTCTGTGGCTCGTTTCGACTTCTCTTGGGGCGATCCTGAATATCACCAAGAGACTTTGGAGAATTTGAAAACTGCTATCAAATCTACTAAGAAACTTTGTGCTGTAATGCTGGACACGGTGGGAGCAGAGATGCAGGTAGTTAACAAAAGTGAGAAATCTATCTCGCTTCAGGCTGATGCTCAGGTTGTTCTGACTCCTGACCGGGGACAAGAAGCATCTTCACAGATACTGCCTATCAATTTTGATGGACTGGCAAAGTCAATGAAGAAAGGAGACACAATTTTTGTTGGTCAATACTTGTTCACGGGAAGTGAAACTACTTCTGTATGGCTAGAGGTGTCCGAAGTTACAGGTCAGGATGTTGTTTGTAGTATAAAAAATTCAGCAACATTAGCAGGGTCATTGTTCACTTTGCATGCCTCTCAGGTTCACATTGATTTGCCTACCCTCACTGATAAAGACAAGGAGGTTATAAGCTCCTGGGGAGTAAAAAACAAAATTGATTTTCTGTCGTTGTCATATACTAGGCATGCCGAAGATGTTCGCCAGGCCCGTGAATTCCTTTCTAAGTTAGGTGATCTAAGCCAGACTCATATATTTGCAAAGATTGAAAATGTTGAGGGATTGACCCACTTTGATGAAATTCTACAAGAAGCAGATGGTATCATCCTTTCCCGTGGGAATTTGGGCATTGATCTTCCCCCGGAGAAGGTATTTTTCTTTCAAAAGTCTGCCCTTTACAAGTGTAATATGGCTGGGAAACCTGCTGTGCTTACACGCGTTGTGGATAGTATGACTGACAACTTAAGGCCAACTCGTGCAGAAGCCACTGATGTTGCCAATGCTGTTTTAGATGGAAGTGATGCAATACTTCTAGGTGCCGAGACTTTACGCGGGTTATACCCTGTTGATACTATTTCTACAGTTGGCAAAATTTGTGCAGAAGCTGAGAAGGTTTTTAATCAAGACCTTTATTTTAAGAAAACTGTCAAATATGTTGGAGAGCCCATGTCCCACTTGGAATCTATTGCATCCTCTGCGGTACGAGCAGCTATTAAGGTGAAGGCTTCTGTTATTATTTGCTTCACTTCATCTGGAAGGGCTGCAAGATTGATAGCAAAATATAGGCCAACCATGCCAGTTCTCTCTGTTGTGATCCCCCGACTGAAGACAAATCAGCTGAAATGGAGCTTTAGCGGAGCTTTTGAGGACCAACTGCAAACTCATTTGTGGGAAAGCCTGTTTACAATTAGTGCTAGGCAATCACTTATCGTAAGAGGTCTCTTTCCCATACTTGCCGATCCTCGACATCCAGCCGAGTCAACTAGTGCCTCAAACGAGTCTATCCTAAAGGTTGCCCTTGATCATGGAAAAGCAGCAGGAGTTATAAAGTCGCACGATCGAGTTGTTGTTTGCCAGAAAGTTGGTGATTCATCTGTGGTTAAGATTATCGAGCTTGAAGATTAA 1629 0.4334 MHSSHLLLEEPIRMVSILEPSKASFFPAMTKIVGTLGPKSRSVEVISACLKAGMSVARFDFSWGDPEYHQETLENLKTAIKSTKKLCAVMLDTVGAEMQVVNKSEKSISLQADAQVVLTPDRGQEASSQILPINFDGLAKSMKKGDTIFVGQYLFTGSETTSVWLEVSEVTGQDVVCSIKNSATLAGSLFTLHASQVHIDLPTLTDKDKEVISSWGVKNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTHIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFFFQKSALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVDTISTVGKICAEAEKVFNQDLYFKKTVKYVGEPMSHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEDQLQTHLWESLFTISARQSLIVRGLFPILADPRHPAESTSASNESILKVALDHGKAAGVIKSHDRVVVCQKVGDSSVVKIIELED* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00590 542 FunFam Pyruvate kinase 371 528 - -
Lapu6g00590 542 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 375 IPR015813 GO:0003824
Lapu6g00590 542 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu6g00590 542 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Lapu6g00590 542 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Lapu6g00590 542 SUPERFAMILY PK C-terminal domain-like 358 537 IPR036918 -
Lapu6g00590 542 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu6g00590 542 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu6g00590 542 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu6g00590 542 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu6g00590 542 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu6g00590 542 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu6g00590 542 Gene3D - 30 362 IPR040442 -
Lapu6g00590 542 PANTHER PYRUVATE KINASE 27 527 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu6g00590 542 NCBIfam pyruvate kinase 30 440 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu6g00590 542 Gene3D - 363 540 IPR036918 -
Lapu6g00590 542 FunFam Pyruvate kinase 96 202 - -
Lapu6g00590 542 Pfam Pyruvate kinase, alpha/beta domain 395 534 IPR015795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00590 Lapu-Chr6 6139289 6147704 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00590 K00873 - gmx:100781158 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00590 6 6139289 6147704 Lapu6g00590 6 6139289 6147704 ECH
Lapu6g00590 6 6139289 6147704 Lapu7g01113 7 22402919 22412191 PCT