Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00855 ATGGACTCTCTGTCTAGAATTCACCATTTTCACCTCTCACTCTCTCACTCCCCACCGCATCGGAGTCTTAAGTTGTTGCACCGTTCTTCATTTCCAACACCCTTTTCTTCCCTCTCTCCATTGCTCCCTCCATTCTCTCCAATAAGAGCTTCATCTTCACCCTCTTCCAAACAAAACGCATTTCACAAACCCCAAATCCCCTTAACCCAACTTCTCAAAACCCTAAACCCTCTTCTTTCCCCTCTCGTCAAACCCACCTGCATCGCCATAGCCGTCACCGCATTCTCCTTCATGCGCTTCCACCCTCCCTCGGTTGCATCCGCGCTTCCCCCTGTCCCTCCGCCGTCGTCCTCCGCATCGGAAACTCTCCCCGACGAGACTGCCGAGTCGGAAACTCTCCCCGACGAGACTTCCGCGTCGGAAACTCTCCCCGACGAGACTGCCGCGTCGGAAACTCTCCCCAACGAGACTGCCACGTCGGAAACTCTCCCCGACGAGACTGCCACGTCGGAAACTCTCCCCGACGAGACTGCCGCGTCGGAAACTCTCCCCGACGAGGGTGACCCGGCGGGAGCTCTCTCCGACGAGAGCACCGCCGATGAGCAACCGAGCCACGACGTCGTGGAGCTTGAGTCCCTCCTACGGACGAAAATTAGAGCCAGCGAAATAGACGAAGCGCTCCTGGTTCTGGACCGTCTAATCGAACTCGATTCGGAGGAGCTGGAGTACCCGTTCTTGAAGGCGCACCTGCACCTGCTCAACGGCGAGCACGAACTCGCAGCGAAGGAGTTTGAGGAGTTGCTTCAGAGGGATCCGTTCCACGTGGAGACCTACCGATGCCTGTTAATGCTGAGTATGGAGACGAAAGCGCCGACCACGGATCTTCTGAAGAAAATCGAAGAGGCCGTGAAGGTTTGCGAGGAGCAAGAGAGGGATTCCGATGTGAGAGACTTTAAGTTGTTGATTGCGCAGATAAAGGTTATCGATGGTGATTTATCTGATGCGTTGAAGGTGTGTGAGGAGCTTGTGAAGGAAGAACCCAAGGATTTTAGACCTTACTTCTGTCAGGGTATGGTGTATACAATGCTAAAAGATATTGATGAAGCTGAGAAGCATTTTGAGAAGTATCGTACGCTTGTTCCCGAGAATCATCCTTCTAAGCAGTATTTTGAAGACAATAGTAAGATTTTGGAGACGGGACTACTAGGTGCAAAGAGCTGA 1221 0.5299 MDSLSRIHHFHLSLSHSPPHRSLKLLHRSSFPTPFSSLSPLLPPFSPIRASSSPSSKQNAFHKPQIPLTQLLKTLNPLLSPLVKPTCIAIAVTAFSFMRFHPPSVASALPPVPPPSSSASETLPDETAESETLPDETSASETLPDETAASETLPNETATSETLPDETATSETLPDETAASETLPDEGDPAGALSDESTADEQPSHDVVELESLLRTKIRASEIDEALLVLDRLIELDSEELEYPFLKAHLHLLNGEHELAAKEFEELLQRDPFHVETYRCLLMLSMETKAPTTDLLKKIEEAVKVCEEQERDSDVRDFKLLIAQIKVIDGDLSDALKVCEELVKEEPKDFRPYFCQGMVYTMLKDIDEAEKHFEKYRTLVPENHPSKQYFEDNSKILETGLLGAKS* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00855 406 ProSiteProfiles TPR repeat profile. 350 383 IPR019734 GO:0005515
Lapu7g00855 406 MobiDBLite consensus disorder prediction 108 206 - -
Lapu7g00855 406 Gene3D Tetratricopeptide repeat domain 187 400 IPR011990 GO:0005515
Lapu7g00855 406 SMART tpr_5 241 274 IPR019734 GO:0005515
Lapu7g00855 406 SMART tpr_5 350 383 IPR019734 GO:0005515
Lapu7g00855 406 SMART tpr_5 316 349 IPR019734 GO:0005515
Lapu7g00855 406 PANTHER TRANSMEMBRANE PROTEIN 262 386 - -
Lapu7g00855 406 MobiDBLite consensus disorder prediction 119 177 - -
Lapu7g00855 406 SUPERFAMILY TPR-like 220 377 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00855 Lapu-Chr7 10234229 10236368 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00855 - - vra:106770360 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00855 7 10234229 10236368 Lapu7g00855 7 10234229 10236368 ECH
Lapu6g00453 6 4706380 4707828 Lapu7g00855 7 10234229 10236368 PCT