Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00453 ATGTTCAGTCTCATATCTCCCACTAGGGCTTTACCCATGGATTCTCTGTGCTACTCTAATCTCACTTCTCCATTTCCCACGCCCTTAACCTCTTCCCTCTCTTTCCGCTCCCGACCACCACCACACTTTCCCTCTTCCTCGTCGTTTAGGTTACCTTCCATCAGAGCCTCCTCTTCACGCTCCTCAAACGAGCCCGCGTTTCGCTCATCCAAAAATGCCCCCTCTCTCTCCCCGCTTCTCCAAACCCTAAACTCCTTCCTCTCCCCCCTCGCCCAAACTACCTGCGTCGTCATCGCCGCCACCGCCTTCTTTTTCATGCGCTTCCACCACGCGCCCGCCATCGCCGCCACTCTCTCCCCGCCCGCTGCCGAGTCCGAGACTGCGCTTACTGAGGAGGAAGCCGAGAGAGCTCTGGAGGAGCGGCTCAGCGCCAACCCCGCTGATGTGGACACGCTCCGCGCGCTCATGGAGTGCAAGATCAAAGCGCGTAAGATTGACGAAGCGTTCGGCGTTCTGGACCGTCTCATCGAGCTCCAGCCGGAGGAGTACGAGTGGCCGCTGCTGAAGGCCAACATGCACATCTACAACGACAACCACGCCGCGGCGCGTGAACTGTTCGAGGAAATGTTGAAGAAGGACCCTCTCCGCGTGGAAGCGTTCCATGGCCTCGTCATGGCGACTTCGCAGTTGAACGAGCCGCTGAGAGCGTTGTTGAAGAGAGTGGAGGCAGCGAGTGAGGCCTGCAGGAAGCAGAATAGGGACTCGGATGTGAGGGACTTCAGGCTCTTGATTGCTCAGATTAAAGTGATGGAAGGGGATTTCCCTGAGGCGCTTAAGGCTTATCAGGATTTGGTGAAGGAAGAGCCCAGGGATTTCAGGCCTTATTTGTGTCAGGGTATTATATATACCCTGCTAAGGAAGAAAGACGAAGCTGATAAGCAATTTGATAAGTTTCGCAGGCTTGTTCCTAAGGACCATCCTTACATGGAGTATTTCGAGGACAATATGTTCGCCACCAAGTTCTTCTCGCAGAAATTGGAGAGGGAGGGAGCAGGTGGTAGGGGCTGA 1068 0.5534 MFSLISPTRALPMDSLCYSNLTSPFPTPLTSSLSFRSRPPPHFPSSSSFRLPSIRASSSRSSNEPAFRSSKNAPSLSPLLQTLNSFLSPLAQTTCVVIAATAFFFMRFHHAPAIAATLSPPAAESETALTEEEAERALEERLSANPADVDTLRALMECKIKARKIDEAFGVLDRLIELQPEEYEWPLLKANMHIYNDNHAAARELFEEMLKKDPLRVEAFHGLVMATSQLNEPLRALLKRVEAASEACRKQNRDSDVRDFRLLIAQIKVMEGDFPEALKAYQDLVKEEPRDFRPYLCQGIIYTLLRKKDEADKQFDKFRRLVPKDHPYMEYFEDNMFATKFFSQKLEREGAGGRG* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00453 355 MobiDBLite consensus disorder prediction 43 73 - -
Lapu6g00453 355 Gene3D Tetratricopeptide repeat domain 130 250 IPR011990 GO:0005515
Lapu6g00453 355 Coils Coil 234 254 - -
Lapu6g00453 355 Gene3D Tetratricopeptide repeat domain 251 332 IPR011990 GO:0005515
Lapu6g00453 355 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 26 327 - -
Lapu6g00453 355 SUPERFAMILY TPR-like 132 326 IPR011990 GO:0005515
Lapu6g00453 355 Pfam Tetratricopeptide repeat 262 290 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00453 Lapu-Chr6 4706380 4707828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00453 - - vra:106756779 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00453 6 4706380 4707828 Lapu7g00855 7 10234229 10236368 PCT