Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00716 ATGGCTACCATCTCCGCTGCTACCACAACCCCATCGATCACTCGCGCATGTCCTGTGCAAAAGCGCCCTCTGGGGGTCTCATCTCCTGTTCTTGGATTGCCAACAATGGGTAAGGTGGGAAGAATGAGGTGCTCCATGGAGGAAAAGCCTTCTGTGAAAGAAAGCAGCAGCTCAGGCATGGGAATGGGAGCATCTTTGATGGCAGCTACCTGTGCTGCAGTGATGTCAAGCCCAGCCATGGCCTTGGTGGATGAGAGACTGAGCACTGAAGGAACCGGGCTTCCCTTTGGGCTTAGCAACAACCTTCTTGGTTGGATCCTGTTGGGTGTCTTTGGTCTTGTATGGGCTCTCTTCTTTGTCTACACTTCCACTCTTGAAGAGGATGAAGAGTCTGGATTGTCCCTTTAG 408 0.5221 MATISAATTTPSITRACPVQKRPLGVSSPVLGLPTMGKVGRMRCSMEEKPSVKESSSSGMGMGASLMAATCAAVMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILLGVFGLVWALFFVYTSTLEEDEESGLSL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00716 135 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
Lapu7g00716 135 Pfam Photosystem II reaction centre W protein (PsbW) 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00716 Lapu-Chr7 8354727 8356654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00716 K02721 - gmx:100305788 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00716 7 8354727 8356654 Lapu7g00716 7 8354727 8356654 ECH
Lapu6g00331 6 3157835 3159858 Lapu7g00716 7 8354727 8356654 PCT