Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00331 ATGGCAACCATCATCGCCGGCACCCCAACAACATCGATCTCTCGCGCAGGTCTTGTGCTCAAGCGACCTTTTGGGGTCTCATCCTCTACAGTTCTTGGATTGCCAGCAATGGGTAAGGCAGGGAAAGTGAGGTGCTCCATGGAGGAAAAACCTTCCGTGAAGGAAAGCAGTTCAAATGTGGGAATGGGAGCATCATTGCTAGCAGCAGCATGCGCCGCCACCATGTCAAGCCCAGCCATGGCTTTGGTGGATGAGAGACTGAGCACTGAAGGGACAGGGCTTCCCTTTGGGCTTAGCAACAACCTTCTTGGTTGGATCCTGTTCGGTGTCTTCGGTCTTATATGGGCTCTCTTCTTTGTCTACACTTCCACTCTTGAAGAGGATGAAGAGTCTGGATTGTCCCTCTAA 408 0.5196 MATIIAGTPTTSISRAGLVLKRPFGVSSSTVLGLPAMGKAGKVRCSMEEKPSVKESSSNVGMGASLLAAACAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVYTSTLEEDEESGLSL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00331 135 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
Lapu6g00331 135 Pfam Photosystem II reaction centre W protein (PsbW) 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00331 Lapu-Chr6 3157835 3159858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00331 K02721 - gmx:100306223 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00331 6 3157835 3159858 Lapu7g00716 7 8354727 8356654 PCT