Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00684 ATGGAATCAACTCATATAATATCCATTACAAATGGTGAAGACAATGTTGCTCCAAGGAAGAATAATAAAACCTTTAAATTTTCACTTACACTTCCACCCGTTTTTTCCATCCATCTCTGGGATAAGCAAAAGAATGACACTAAAAAAGTTATCCACAGCATCAAAGTTGGAATCTCCCTTGTTTTGATTTCACTTCTATATCTCTTGGATCCTCTTTACGAGCAAGTTGGAGAAAATGCTATATGGGCTATCATGACTGTGGTCGTCACCTTGGAATTTTCTGCAGGAGCTACGCTAGGCAAAGGTTTAAATCGCGGAATGGGAACTATATTAGGAGGTGGATTGGGTTGCATAGCAGCAGTTTTGGCTCAAAATCTTCATGGATTTGGCAACTCCATTGTAATTGGTGCTTCTGTATTTATCTTTGGGTGCATGGAGGAATATGTCAAATTGGGTAGTGAAATAGAAAATAAGCCTGGTGCTAGCTTGAGTGTTTGCAAGTCGTTGTTGGACTCCAAATCAAAGGATGAGGTGCTGGCAAATTTTGCAAAATGGGAACCCTGGCATGGAAAATTTGGATTTTTCTATCCTTGGGAGAAGTACCTAAAGATTGGAGAGGTTCTTCGAGAACTGGCTGCAGTAGTTCTTGCTTTGGAAGGTTGCATCCAAGCCTCAAAAACGGCCATGAAAGTGGAATCAGTGACTCAAACTGTTGAAATGGAATCACGTGAAGCAATTGGGTCAGGAATTGTGTGGAGTCTGCGAGAACTTGGGGAGAGCATGAAGCAAATGAGGAAATGTGAGGCAGAGGCTGACATATCAGCAAAGTTGAAGACAGTGAGAGGAGAGATAAGCTTGGTGATTTCTACGTTGAAGATGGCAGCAATTGATAACATGGATGATGCACTTGCAGCAGCAAGCTTCGTGTTCTTACTGAAGAAAATGGTGGAGAAAGTAGAAGAACTCACCAAAGAGGTGGAGCAACTAGGAGACTTTGCTGGTTTTCGTGCTCATTCAACTGTCATCTAG 1029 0.4169 MESTHIISITNGEDNVAPRKNNKTFKFSLTLPPVFSIHLWDKQKNDTKKVIHSIKVGISLVLISLLYLLDPLYEQVGENAIWAIMTVVVTLEFSAGATLGKGLNRGMGTILGGGLGCIAAVLAQNLHGFGNSIVIGASVFIFGCMEEYVKLGSEIENKPGASLSVCKSLLDSKSKDEVLANFAKWEPWHGKFGFFYPWEKYLKIGEVLRELAAVVLALEGCIQASKTAMKVESVTQTVEMESREAIGSGIVWSLRELGESMKQMRKCEAEADISAKLKTVRGEISLVISTLKMAAIDNMDDALAAASFVFLLKKMVEKVEELTKEVEQLGDFAGFRAHSTVI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00684 342 Pfam Aluminium activated malate transporter 41 155 IPR020966 GO:0015743
Lapu7g00684 342 Pfam Aluminium activated malate transporter 161 285 IPR020966 GO:0015743
Lapu7g00684 342 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 37 158 - -
Lapu7g00684 342 Coils Coil 312 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00684 Lapu-Chr7 7920304 7923274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00684 38 270 Miscellaneous Gene Families AT5G46610 32.028 8.18e-35 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00684 K25841 - gmx:100527892 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00684 7 7920304 7923274 Lapu7g00684 7 7920304 7923274 ECH
Lapu1g02166 1 36163282 36165566 Lapu7g00684 7 7920304 7923274 PCT
Lapu6g00703 6 7372706 7374767 Lapu7g00684 7 7920304 7923274 PCT