Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02166 ATGGAATCAAGTCATGTAATAGCCATTACAAATGGAGAACAGAATAATATAGCACATACAAGGAAGAAGAATAAAACATTCCAATTTCAACTTCCACCCATCATTTCCCATCTTGGGAAAAATGAAGTCCACTGTGTCTCCATTACTTCCAATCCCAGACACAAGCAGATGCAACAAAGAGATCAAGACACCAGGAAGATGATCCACTGCATCAAAGTGGGAATCTCCTTGGTTTTGGTTTCACTCCTTTACCTCTTGAATCCTCTCTTTAAGCAAGTTGGAGAAAATGCAATGTGGGCTATTATGACAGTTGTTGTCATGTTTGAATTCTCTGCAGGAGCCACACTAGGAAAGGGCTTCAACCGTGGGCTAGGAACGATTATAGGAGGAGGACTAGGTTGCTTAGCAGCAATTTTTGCCCAAAGCATTGGGATTGGCAGGGTTGGCAACTCGATTATAATCGCTGCTTCAGTATTTATATTTGGATCATTTGCTACGTATCTTCGACTGATTCCAAGCATAAAGAAAAGATACGACTATGGAGTGATGATATTCATGCTGACTTTCAATCTAGTTGTGGTTTCTGGCATACGTGTGAACGTGAAAGTATGGGAATTAGCCCGCGAACGTCTCTTGAATATACTGATGGGCTTCATTGTGTGCGTTTGTGTGAGCTTGTTTGTCTTTCCTTTGTGGGCCAGTGATGAACTTCACGATTCCATCGTCTCCAGATTCCTTGACCTTGCCAATACAATTCAAGGTTGTTTGGGCGAATGTAGCAAAATCATTAATGAAAAGGAAAATGAACCCCGTGCAAGCTTCAACGTTTGCAAGTCAGTGATGAACTCAAAGTCAAAGGATGAATCACTGGCAAATTTCGCAAAATGGGAACCCTGGCATGGAAAATTTGGATTGTCCTACCCTTGGGGAAGGTACTTAAAAATTGGGGAGATTCTTCGAGAACTGGCTGCATTTATTCTTGCAATGGCTCGTTGCCTCGAAGCATCAAAAGGGCCAATGACCAGTTTGAGAGAATCACAATGGATCCATTTAGAAACATGCGAAGCAATTGAGTCAAAGGTTTCGTGCATTCTGCGAGAACTAGGAGACAGCATGAAGCAAATGATGAAATGTGATGCAAAGGGTGGCTTTTCGGACCAGTTGAAAGCCGCAAGACAAGATTTAAGCTTCATAGTTTCCACGTCCAAAATGGTTCAACTTGAGGAAAGTCAAGTGGTAGCCATTGCTAGCTTCGTCTTCTTGCTCATGGAAGTGATAGGGAAGGTTGAGGAATTGGTGAAAGAGGTGGAGGAACTTGGAGATATCGCTGATTTTCACACCCCAATAACTGCATTGTCTTCGTAG 1365 0.4242 MESSHVIAITNGEQNNIAHTRKKNKTFQFQLPPIISHLGKNEVHCVSITSNPRHKQMQQRDQDTRKMIHCIKVGISLVLVSLLYLLNPLFKQVGENAMWAIMTVVVMFEFSAGATLGKGFNRGLGTIIGGGLGCLAAIFAQSIGIGRVGNSIIIAASVFIFGSFATYLRLIPSIKKRYDYGVMIFMLTFNLVVVSGIRVNVKVWELARERLLNILMGFIVCVCVSLFVFPLWASDELHDSIVSRFLDLANTIQGCLGECSKIINEKENEPRASFNVCKSVMNSKSKDESLANFAKWEPWHGKFGLSYPWGRYLKIGEILRELAAFILAMARCLEASKGPMTSLRESQWIHLETCEAIESKVSCILRELGDSMKQMMKCDAKGGFSDQLKAARQDLSFIVSTSKMVQLEESQVVAIASFVFLLMEVIGKVEELVKEVEELGDIADFHTPITALSS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02166 454 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 54 448 - -
Lapu1g02166 454 Pfam Aluminium activated malate transporter 61 440 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02166 Lapu-Chr1 36163282 36165566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02166 62 401 Miscellaneous Gene Families AT5G46600 41.193 1.77e-85 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02166 K25841 - gmx:100802201 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02166 1 36163282 36165566 Lapu1g02166 1 36163282 36165566 ECH
Lapu1g02166 1 36163282 36165566 Lapu7g00684 7 7920304 7923274 PCT