Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00673 ATGTTCTGCAAAACCAAAACCCACACTGTTTTCTACCATAGCAACGCAAGATCTATATCAAGCCTCAAAGTGGTGTGGCGCAAGGACCAAGCACTGGACCGAGCCATAGAGCACGACAAGCGTTACAAGCAATGTGCCCGCGTCGTCAAAGAGGTCCTCAACGAGCCCGGCCAAGTCATTCCTCTTCGCTACCTCGAGAAGCGCCGCGAAAGGATGCGCCTCAAGGTCAAAGCCGAAACCTTTCTCAACCAAAACCCCGGTTTGTTCGATGTCTACTATAACCGCATCAAACCCAAAACCGAACCGGTTCGCTTCATCCGCCCCTCCGACCGCCTTCACCGCTTTCTCCAGGAAGAGCAACGGATTTTCTCCGAGAACGAACCCTTCATTGTCTCCAAGTTGTGTAAACTGTTGATGATGTCCAAGAACAAGTTTCTTAGTGCTGATAAGTTGCTGCACGTGAAGAGGGAGTTCGGCTTCCCTAACGATTTTTTGGTTGATTTGGTTCCTCGGTATCCGCAATATTTTAGGTTAACTGGGTCTCCTGGGGAGGGGAAATCGTTTCTTGAATTGGTTAATTGGAACCCCTTGTTTGCAAAATCCGTTATTCAGGAAAGAGCTGAGGAGGAGAGTGAGCGTTTGGGGATTAGGGTCAGGCCTAGTTTCAATGTGGAGCTTCCGCCAGGGTTTGTGTTGAAGAAAGAGATGAGGGATTGGGTTAGGGATTGGATGGAGCTTGATTATGTGTCTCCTTATGAGGATGTGTCCCATTTGGACCAGGCTTCCAGAGAGATGGAGAAGAGATCCGTTGGAGTGTTCCATGAACTTCTTTCTCTTTCATTGCATAAGAGGATTCCTGTGCCGATCCTTGGAAAATTTTGCGATGACTATAGGTTTTCCAATGCGTTTTCCAGCACTTTTACCAGGCATTCGGGGATATTTTATTTGTCCTTGAAAGGTGGGATTGAAACGGCAGTGTTGAGAGAAGCATACAGAGGTGACGAGTTGGTTGACCGTGATCCGTTGCTTCAGATAAAAGATAAATTTGTTGAGTTGTTGGAGGAGGGGTGGCGGCAAAGAGAGGAGCAATTGAGGTTGAAGCAAGAAAAGATTAAGGAAGATATGCAGGATTATTGTTCCCTCCATTTTTTGTATTGTTGA 1161 0.4694 MFCKTKTHTVFYHSNARSISSLKVVWRKDQALDRAIEHDKRYKQCARVVKEVLNEPGQVIPLRYLEKRRERMRLKVKAETFLNQNPGLFDVYYNRIKPKTEPVRFIRPSDRLHRFLQEEQRIFSENEPFIVSKLCKLLMMSKNKFLSADKLLHVKREFGFPNDFLVDLVPRYPQYFRLTGSPGEGKSFLELVNWNPLFAKSVIQERAEEESERLGIRVRPSFNVELPPGFVLKKEMRDWVRDWMELDYVSPYEDVSHLDQASREMEKRSVGVFHELLSLSLHKRIPVPILGKFCDDYRFSNAFSSTFTRHSGIFYLSLKGGIETAVLREAYRGDELVDRDPLLQIKDKFVELLEEGWRQREEQLRLKQEKIKEDMQDYCSLHFLYC* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00673 386 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 16 372 IPR045040 GO:0003723
Lapu7g00673 386 Pfam Plant organelle RNA recognition domain 28 357 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00673 Lapu-Chr7 7770660 7772785 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00673 - - gmx:100778092 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00673 7 7770660 7772785 Lapu7g00673 7 7770660 7772785 ECH
Lapu6g00749 6 7859077 7862308 Lapu7g00673 7 7770660 7772785 PCT