Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00749 ATGAACAAAAATGGCGTCATTCCGTGGATGAAGCAGCAATGGCGGGGCATAGTGAAAGTGCGTTTGAAATGGGTGAAGAACAGAAGCCTCGACCACGTCATCGACAAGGAAACCGATCTCAAAGCGGCCTGCCTCCTAAAGGACGCCATCAACCGCTCCTCCACCTCCTTCCTCACGGCGAAATCCGTGGCGGACTGGCAGAAGCTCCTCGGCCTCACCGTTCCCGTCCTCCGCTTCCTCCGCCGCTACCCCACCCTCTTCCAGGAGTTCCCCCACCCGCGGTGGCCCTCTCTCCCCTGCTTCCGCCTCACCGACACAGCACTTTTCCTACACTCCCAGGAACTCGCCCTCCACCAAACTCACGAAAACGACGCCGTCCAACGCCTCTCCAAGCTCCTCATGATGACTCAGTCACGCGCCCTGTCCCTCTACTCCCTCCACGCACTCAAGTGGGACCTCGGCTTACCCGACTCCTTCGAGAAAACCCTAGTCCCCAACTTCCCTAACGACTTCCAATTCGTCAAGTCCCCCAACGGCGTCGTTTCGCTCAAACTAGCTCGATGGCCTGAGGAGCTCGCTGTTTCGGCGCTGCAGGAGAGAAACGAGAGTGGGACCCAGTACCGGGAATTCAAGCGGGGACAATCGGCGTTGGCTTTTCCGATGAGGTTTCCGAGGGGTTACGGCGCGCAGAAGAAGGTAAAAACGTGGATGGAGGAGTTTCAGAAACTGCCTTATGTTTCTCCCTATGTTGATTCCTCAAAGATTGATCCCAACAGCGATTTGATGGAGAAGCGCGTGGTTGGGGTTCTGCACGAGCTTTTGAGTTTGACTCTGCACAAGAAAACCAAGAGGAACTACTTGAGGAGCTTGAGGGAAGAGTTGAATCTTCCGCACAAGTTTACCCGGATTTTCACCAGGTATCCCGGCATTTTTTACCTCTCATTGAAGTGTAAAACGACCACTGTTACTCTTAGGGAAGGGTACCAGAGTGGGAAACTGGTTGACCCGCACCCTCTTGTTCGACATAGGGATAAGTTCTACCGTGTCATGCAGACGGGGCTTCTCTATCGCGGGGACGGGTCATTGAAACATGAGGACAACAATTCGTTGGTCGAGAATGATGAGCTAAGAAGTGAGGAATCTGAGGAGGAAGAGGTTGAAACGAGTGATGAACTCTGCGAGGGTGAATCTAGTGAATAA 1200 0.5383 MNKNGVIPWMKQQWRGIVKVRLKWVKNRSLDHVIDKETDLKAACLLKDAINRSSTSFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFQEFPHPRWPSLPCFRLTDTALFLHSQELALHQTHENDAVQRLSKLLMMTQSRALSLYSLHALKWDLGLPDSFEKTLVPNFPNDFQFVKSPNGVVSLKLARWPEELAVSALQERNESGTQYREFKRGQSALAFPMRFPRGYGAQKKVKTWMEEFQKLPYVSPYVDSSKIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYQSGKLVDPHPLVRHRDKFYRVMQTGLLYRGDGSLKHEDNNSLVENDELRSEESEEEEVETSDELCEGESSE* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00749 399 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 12 383 IPR045040 GO:0003723
Lapu6g00749 399 MobiDBLite consensus disorder prediction 364 399 - -
Lapu6g00749 399 Pfam Plant organelle RNA recognition domain 25 353 IPR021099 GO:0003723
Lapu6g00749 399 MobiDBLite consensus disorder prediction 376 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00749 Lapu-Chr6 7859077 7862308 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00749 - - vun:114164383 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00749 6 7859077 7862308 Lapu6g00749 6 7859077 7862308 ECH
Lapu6g00749 6 7859077 7862308 Lapu7g00673 7 7770660 7772785 PCT