Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00645 ATGACCGGAGTGGTCATGGTTACCAAGGGCGGTAGATGCGGCGGCGGTGGGAAGCGGTCAAGGGCGGCGCGAACCGCCGAGGAAGAAGAAGATCAGCAGAACCAGCTCTCCCTCGTGGCTTTTCTCTTGGCAGCCATCAGAAAATCGATGGTTTCGTGCAGGGTGGACCCACCCGACGATGTCATCTCCACCGTCCATCACATGGAGATTGGATGGCCTACCAACGTTCAGCACATCACTCATGTCACCTTCGACCGCTTCAACGGTTTTCTCGGTCTTCCTTACGAATTCCAAGTTGAGATCCCTGCTAGGGTCCCCAGTGCTAGTGTAAGTGTGTTTGGCGTCTCCGCAGAATCTATGCAGTGTTCTTATGATTCTAAAGGAAACAGCGTCCCCACTATTCTCCTGCTAATGCAGGACCGGCTATACTCACAGGGAGGCTTAAAGGCTGAGGGTATATTTCGCATAAACCCAGAAAATAGTCAAGAGGAGCACGTGAGGGACCAGTTGAATAGGGGCATTGTGCCTGATGACATTGATGTGCACTGCTTGGCGGGACTAATTAAAGCCTGGTTCCGAGAGCTACCTTCAGGAGTGCTAGATGGACTTTCACCTGAACAAGTTCTTCAATGCAATACAGAAGAAGAATCTGTTGAGCTTGTGAAGCAGCTAAAGCCAACTGAGTCTGCCTTGCTCAGCTGGGCTATTGATCTCATGGCCGATGTTGTAGAAGAGGAGGAATTTAACAAAATGAATGCAAGAAATATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCTCTAACTGCCCTGATGCATGCGGTTCAAGTGATGAACTTACTCAAGACGCTTATCACAAAGACACTTCGAGAACGCGAAGAAACAACAACAGGTGGGTATTCTCCCATGTCTTCTCATTCATCTGGTCGCCAGTCTGAAGATGAATATGACAGTCAGCGAGAAATGGACACAAGCGGTGAGTTGAGAGGCACCAAATCAGATTATGATGCTCACTATGGCCACAGCAGTGAAGGGGAGGCTGAATCTTTAAGCGAGATAGAGGAGTGCTTCTTGAAGCAGTTGGATGACAACACAAAGGGTTTCTCACAAGAACCTGCAGGTCATTTGGAAAAGTATGTTAGCACCATAAGTTACACTGCCTATAGCATGGAACCTTCTATATCTGTTACTGACAACAAAGCTGGGAATTCCTGCTCGAGGACAACACTGACTGGTTTAGCCTCAAGTGTTGACCCAAGTAGTTCATCAATAGGATGTACGAGCACCAAAGATGTGGAGATGGTGGATAAATTTGCTGATTCTATTTCACCTGTGCCACTCCTTGCTTCTAGCTAG 1365 0.4784 MTGVVMVTKGGRCGGGGKRSRAARTAEEEEDQQNQLSLVAFLLAAIRKSMVSCRVDPPDDVISTVHHMEIGWPTNVQHITHVTFDRFNGFLGLPYEFQVEIPARVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTESALLSWAIDLMADVVEEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLITKTLREREETTTGGYSPMSSHSSGRQSEDEYDSQREMDTSGELRGTKSDYDAHYGHSSEGEAESLSEIEECFLKQLDDNTKGFSQEPAGHLEKYVSTISYTAYSMEPSISVTDNKAGNSCSRTTLTGLASSVDPSSSSIGCTSTKDVEMVDKFADSISPVPLLASS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00645 454 Pfam P21-Rho-binding domain 69 100 IPR000095 -
Lapu7g00645 454 CDD RhoGAP 132 289 - -
Lapu7g00645 454 Gene3D CRIB domain 65 100 IPR036936 -
Lapu7g00645 454 FunFam Rho GTPase-activating protein 5 100 293 - -
Lapu7g00645 454 MobiDBLite consensus disorder prediction 294 353 - -
Lapu7g00645 454 SMART RhoGAP_3 129 292 IPR000198 GO:0007165
Lapu7g00645 454 Gene3D Rho GTPase activation protein 101 294 IPR008936 -
Lapu7g00645 454 PANTHER MKIAA1688 PROTEIN 22 362 IPR044785 GO:0005096
Lapu7g00645 454 ProSiteProfiles Rho GTPase-activating proteins domain profile. 115 295 IPR000198 GO:0007165
Lapu7g00645 454 ProSiteProfiles CRIB domain profile. 70 83 IPR000095 -
Lapu7g00645 454 MobiDBLite consensus disorder prediction 298 312 - -
Lapu7g00645 454 SUPERFAMILY GTPase activation domain, GAP 111 289 IPR008936 -
Lapu7g00645 454 SMART PBD_5 70 104 IPR000095 -
Lapu7g00645 454 Pfam RhoGAP domain 132 266 IPR000198 GO:0007165
Lapu7g00645 454 MobiDBLite consensus disorder prediction 313 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00645 Lapu-Chr7 7441959 7445632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00645 - - gmx:100801481 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00645 7 7441959 7445632 Lapu7g00645 7 7441959 7445632 ECH
Lapu6g00757 6 7932039 7935369 Lapu7g00645 7 7441959 7445632 PCT