Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00757 ATGACGGGGCAAGTCGTGGTGACCAGCGTAGGCGGATGCGGTGGTGGTAGGGGCCGGAGAGGCGGTGAGGAGGAGCAAAACCCAGCGTCGCCGGTGGCCGTTCTGTTGGCGGCGCTGAGGAAATCGATGGTGGCGTGCAGTGTGGACAGTCCCGACGATGTAATCTCCGCTGTCCATCACCCCATGGAGATCGGATGGCCCACAAACGTGAAGCATGTTAGTCATGTCACTTTCGATCGCTTCAATGGGTTTCTGGGTCTTCCTCTTGAGTTGGAGGTTCATGTCCCCGCTCCTGTTCCCAGTGCTAGTGTTAGTGTGTTTGGCGTCTCAGCAGAATCAATGCAGTGTTCCTATGATTCAAAAGGAAACAGTGTCCCCACCATTCTACTGCTAATGCAAGAGCGATTATACTCGCAGGGTGGCCTAAAGGCTGAAGGTATATTTCGCATAAATCCAGAGAACAGTGAAGAGGAGCATTTAAGGGAGCAGTTGAATAAGGGTATTGTGCCTGATGACATAGATGTCCACTGCTTGGCAGGCCTAATCAAAGCATGGTTCAGAGAGCTTCCTTCAGGAGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTGAGTGCAACACAGAAGAAGAGTCTGTTCAGCTTGTGAAGCAGCTAAAGCCAACTGAGTCAGCCTTGCTCAACTGGGCTATTGATCTTATGGCTGATGTTGTAGCAGAAGAGGATTACAACAAAATGGATGCAAGAAACATTGCAATGGTTTTTGCTCCAAATATGACTCAGATGTCTGATCCATTAACTGCTCTGATGCATGCGGTCCAAGTGATGAATTTACTGAAGACCCTGATACTGAAGACACTCAGAAGACGTGAAGAAACAGCCGAAGAAGGATATTCGCCCATGTCATTTCGTTCATCTGATCGCCAATCTGAGGATGACTATGATAGTCAGCAAGAAATGGATACCAGCGGTGAATTGAGGGAGACCAAGTCTGAAGATAACGATGATGATGATGATCATCACGATGTTAACTACAGTCCTCCCACTGAAGAGGACGGGGAGGCTGATGCAGCATCAGTAAGTGAGATAGTGGAATGCTTCTTGAAACGTTTGGATGAGAAAACAAAAAGATTCTCAGAAGAACCTGTAGAGTATTTGCAAGAGAAGTTAGAGAGCCCCAAGAGTTGCTCTGTCTATAACTTGGAATCTGCTTTATCATTTACTGATATCAAAACCGAGAATTCCTGCTTAAGTTCCTCTTCCGAAGATGACTCGAGAACAACTCTTACTGCCGAGGAATCAAATGCTGAGACAAGTAGTCCATCAATAGGAAGCACAAGCACCAGTGATGTGGTGATGATCGATAAATTTACAGATTCTGTTTCACTAGTTCCATTGTTTGCATCTAGTTAA 1410 0.466 MTGQVVVTSVGGCGGGRGRRGGEEEQNPASPVAVLLAALRKSMVACSVDSPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENSEEEHLREQLNKGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESVQLVKQLKPTESALLNWAIDLMADVVAEEDYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLRRREETAEEGYSPMSFRSSDRQSEDDYDSQQEMDTSGELRETKSEDNDDDDDHHDVNYSPPTEEDGEADAASVSEIVECFLKRLDEKTKRFSEEPVEYLQEKLESPKSCSVYNLESALSFTDIKTENSCLSSSSEDDSRTTLTAEESNAETSSPSIGSTSTSDVVMIDKFTDSVSLVPLFASS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00757 469 MobiDBLite consensus disorder prediction 412 446 - -
Lapu6g00757 469 PANTHER MKIAA1688 PROTEIN 22 423 IPR044785 GO:0005096
Lapu6g00757 469 SUPERFAMILY GTPase activation domain, GAP 105 283 IPR008936 -
Lapu6g00757 469 SMART PBD_5 64 98 IPR000095 -
Lapu6g00757 469 ProSiteProfiles Rho GTPase-activating proteins domain profile. 109 290 IPR000198 GO:0007165
Lapu6g00757 469 MobiDBLite consensus disorder prediction 305 347 - -
Lapu6g00757 469 Pfam P21-Rho-binding domain 63 91 IPR000095 -
Lapu6g00757 469 Pfam RhoGAP domain 126 260 IPR000198 GO:0007165
Lapu6g00757 469 CDD RhoGAP 126 276 - -
Lapu6g00757 469 Gene3D CRIB domain 59 95 IPR036936 -
Lapu6g00757 469 CDD CRIB 62 92 - -
Lapu6g00757 469 Gene3D Rho GTPase activation protein 96 288 IPR008936 -
Lapu6g00757 469 ProSiteProfiles CRIB domain profile. 64 77 IPR000095 -
Lapu6g00757 469 MobiDBLite consensus disorder prediction 290 357 - -
Lapu6g00757 469 FunFam Rho GTPase-activating protein 5 94 287 - -
Lapu6g00757 469 MobiDBLite consensus disorder prediction 1 28 - -
Lapu6g00757 469 SMART RhoGAP_3 123 286 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00757 Lapu-Chr6 7932039 7935369 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00757 - K20642 gmx:100812700 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00757 6 7932039 7935369 Lapu6g00757 6 7932039 7935369 ECH
Lapu6g00757 6 7932039 7935369 Lapu7g00645 7 7441959 7445632 PCT