Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00566 ATGGCCGTGACCACTCCCTATCTCAATGCCACAGAAAAAAAGCACTGGTGGCTCACCAACCGAAAGGTTGTTGAGAAATACATCAGAGACGCTCGCACTCTGATGGCCACGCAGGAACAGAGCGAGATCGCTTCGGCGCTGAACCTTCTAGACGCGGCTCTCGCGATCTATCCGCGGCTGGATGAAGCGCTGGAGCTGCGAGCGAGGTCTCTGCTCTGTCTGCGGAGGTTCAAAGAGGTAGCAGATATGCTTCAGGACTACATTCCGAGCCTGAAAATGGCGAACGATGAGTCGGTTTCTTCGGATAGTTCTTCACAACAACTTTCTAGGGAAGGCGCGAAGCTTCTCTCGTCTGAGTCATCGGATTCGGATCAGAGTTTCAAGTGCTTCTCTGTGTCTGACTTGAAGAAGAAGGTTATGGCAGGGCTGTGTAAAAGTTGCGACAAGGAAGGGTATTGGAGGTACTTGGTTCTGGGGAAAGCATGCTGCCACCTAGGCCTAATGGAAGACGCAATGGTCCTTCTCCAAACGGGTAAACGCCTAGCCTCCGCCGCGTTCCGCCGCGAGAGCGTGTGCTGGTCCGATGACAGCTTCTCCCTCTCCAACCCCCTCTTCTCTGGCGACTCAACCCCACCCCGGGCCCCACTCCCGGAGTCTGAAGCAGTGACCCAACTCCTCGCCCACATAAAGCTCCTCCTCCGGCGCCGCGCCGCCGCTCTCGCCGCCCTGGAAGCTGGACTCCACTCGGAGGCCATCCGCCACTTCTCCAAAATCGTGGATGGGCGCCGCGGCGCACCGCAGGGCTTCCTCGCCGAGTGCTACATGCATAGAGCCTCCGCCCACCGCTCCGCCGGCCGAATCGCCGATTCAATCGCCGACTGCAACAGAACCCTCGCCCTGGACCCCACCTGTATCCAAGCGCTGGAAACCCGAGCCTCCATTCTAGAATCCATTCGGTGCTTCCCAGATTCTCTCCACGACCTCGAACACCTCAAACTCCTCTACAACACCATATTGCGCGATCGCAAACTCGCCGGCCCCGCCTGGAAGCGCCAAAACGTGCGCCCCAGGGAAATCCCGGGGAAACTCTGCGCACTCACGACCAAGATCCAGGAACTGAAACAGAGGGTAGCTCACGGAGACACCTCCAACGTGGACTACCACGGTCTGATCGGATTGCGGCGCGGCTGTGGTCGTTCGGAGTTACAGAGAGCGCATTTGCTGCTGTCTCTGAAACACAAGCCCGACAAGGCCATGTGCTTCATCGAGCGGTGCGAGCTGGCGGATGAGCGCGACCTTGATTCGGTTAAGGAGAGGGCGAGAATGTCGTCGCTTCTGCTCTACAGGCTGCTCCAGAAGGGTTACACCAACGTGATGGGTGCCATAATGGACGAGGAGATTGCTGAGAAGCAGAGGATGAAGAAGGTTCTGGAAGCTCAGGCAAAAGCCGAGAAATTGGAAAACAAAAAGTGTACCGTTTCCTCTCCCTCCACCGCGAATCCGGCGGTTTTTCAGGGAGTCTTTTGCCGCGATCTTGCGGTGGTTGGGAACTTGCTTTCGCAAACGGGATTCAACCGTTCCATTCCGGTCAAGTACGAGGCGTTGAGCTGCTGA 1614 0.5725 MAVTTPYLNATEKKHWWLTNRKVVEKYIRDARTLMATQEQSEIASALNLLDAALAIYPRLDEALELRARSLLCLRRFKEVADMLQDYIPSLKMANDESVSSDSSSQQLSREGAKLLSSESSDSDQSFKCFSVSDLKKKVMAGLCKSCDKEGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLSNPLFSGDSTPPRAPLPESEAVTQLLAHIKLLLRRRAAALAALEAGLHSEAIRHFSKIVDGRRGAPQGFLAECYMHRASAHRSAGRIADSIADCNRTLALDPTCIQALETRASILESIRCFPDSLHDLEHLKLLYNTILRDRKLAGPAWKRQNVRPREIPGKLCALTTKIQELKQRVAHGDTSNVDYHGLIGLRRGCGRSELQRAHLLLSLKHKPDKAMCFIERCELADERDLDSVKERARMSSLLLYRLLQKGYTNVMGAIMDEEIAEKQRMKKVLEAQAKAEKLENKKCTVSSPSTANPAVFQGVFCRDLAVVGNLLSQTGFNRSIPVKYEALSC* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00566 537 SMART tpr_5 152 185 IPR019734 GO:0005515
Lapu7g00566 537 SMART tpr_5 271 304 IPR019734 GO:0005515
Lapu7g00566 537 SUPERFAMILY TPR-like 237 332 IPR011990 GO:0005515
Lapu7g00566 537 PANTHER OS01G0273500 PROTEIN 9 537 - -
Lapu7g00566 537 Gene3D Tetratricopeptide repeat domain 9 493 IPR011990 GO:0005515
Lapu7g00566 537 Coils Coil 467 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00566 Lapu-Chr7 6413204 6416598 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00566 - - gmx:106797171 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00566 7 6413204 6416598 Lapu7g00566 7 6413204 6416598 ECH
Lapu6g00854 6 8745023 8748697 Lapu7g00566 7 6413204 6416598 PCT