Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00502 ATGGCACTCTCATTCTCCTCTAAGGGTGTTTTTCTCTGCACCTTCTTATTCTGGTTTGCTATTCTTCTTCACTCAGCGTCTATGGGGGCTGAAGCTCGAAGATCACGCGTTTCCTCTGTGGTTAGCGAAGAGCTTTTTGATTCCATTTTCCTACACAAAGATAACGCTGCATGCCCTGCTAAAAACTTCTACACCTATGATTCCTTCATTATGGCATCCAAAAGCTTCCCTCCATTTGGTTCTACAGGTAGTTTAATCACACGCAAGCGTGAGGTTGCGGCGTTTCTTGCTCAAATTTCGCATGAAACCACAGGTGGGTGGGCTACTGCACCCGATGGACCCTATGCTTGGGGATTGTGCTTCAAGGAAGAAGTTAGTCCTCAAAGTGACTACTGTGATTCCACCAACCAACAATGGCCTTGTTACCCAGGAAAAAGTTATAGAGGCAGAGGACCAATTCAACTTTCATGGAACTACAACTATGGGCCAGCAGGCAAGGCATTGGGATTTGATGGATTGAGAAACCCTGATGTGGTGTTAAACAATTCATTGATTGCCTTTAAAACAGCTCTATGGTTTTGGATGACAGAGCAAAAGCCAAAACCTTCTTGCCACAATGTGATGATTGGAAAATATGTGGCCACAGAAGCTGATATAGCAGCAAATCGATCTGCAGGGTATGGCCTGGTGACTAACATAATCAATGGTGGACTTGAATGTGGAATTCCTGGTGATTCAAGGATGAATAGTCGCATTGGATTCTTCAAAAGATATGCAACTTTGTTTAACGTAGATACAGGACCTAACTTGGATTGTGCATATCAAAAGTCCTTTTAA 837 0.4337 MALSFSSKGVFLCTFLFWFAILLHSASMGAEARRSRVSSVVSEELFDSIFLHKDNAACPAKNFYTYDSFIMASKSFPPFGSTGSLITRKREVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSDYCDSTNQQWPCYPGKSYRGRGPIQLSWNYNYGPAGKALGFDGLRNPDVVLNNSLIAFKTALWFWMTEQKPKPSCHNVMIGKYVATEADIAANRSAGYGLVTNIINGGLECGIPGDSRMNSRIGFFKRYATLFNVDTGPNLDCAYQKSF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00502 278 CDD chitinase_GH19 43 272 - -
Lapu7g00502 278 FunFam Endochitinase (Chitinase) 123 181 - -
Lapu7g00502 278 PANTHER CHITINASE-RELATED 33 276 - -
Lapu7g00502 278 Pfam Chitinase class I 40 272 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lapu7g00502 278 PIRSF Endochitinase 10 278 IPR016283 GO:0004568|GO:0005975
Lapu7g00502 278 ProSitePatterns Chitinases family 19 signature 1. 58 80 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lapu7g00502 278 SUPERFAMILY Lysozyme-like 37 278 IPR023346 -
Lapu7g00502 278 Gene3D - 44 278 - -
Lapu7g00502 278 ProSitePatterns Chitinases family 19 signature 2. 185 195 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lapu7g00502 278 Gene3D Endochitinase, domain 2 123 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00502 Lapu-Chr7 5673931 5674933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00502 10 278 Glycoside Hydrolase AT1G02360 69.145 1.47e-143 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00502 - - vra:106754841 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00502 7 5673931 5674933 Lapu7g00502 7 5673931 5674933 ECH
Lapu6g00919 6 9356348 9357953 Lapu7g00502 7 5673931 5674933 PCT