Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00919 ATGACATCTTCATTCTTTCCCATTCTTCCCTTCTTCTCCACCTTATTAGTTTTCTCTTTTGCTCTTCTCTTCTCTGCACCTTTTGGAGCTGAAGCATGGTCCAAGCCCAACATACCCATCTCTTCTCTCATCACCAAAAGTCTTTTTGACTCCTTTTTCCTACACAAAGATGACACTGCATGCCCTGCTAAAGACTTCTACACCTACGACTCCTTCATTCGTGCATCAAAATCCTTCCCTGCATTCGGTACCACTGGTTGCTTAGCCACGCGCAAGCGTGAGATTGCTGCGTTTCTTGCTCAGATTTCCCATGAAACCACTGGTGGGTGGGCTACTGCACCTGATGGTCCATTTGCTTGGGGCTTGTGCTTCAAGGAAGAAATTAGTCCTCAGAGTAATTACTGTGATTCTACTAACACCCAATGGCCTTGCTTCCCTGGCAAAAGTTATAAGGGAAGAGGACCGATTCAACTTTCTTGGAACTACAACTATGGTCCAGCAGGGAAGGCGTTGGGATTTGATGGGCTGAGGAATCCAGAGATTGTGGCGAACAATTCAGTGATAGCCTTTAAAAGTGGTCTGTGGTTTTGGATGACAGAGCAAAAGCCAAAACCTTCTTGCCACGACGTGATGGTTGGGAAATACGTGGCTACAGAAGCTGACATAGCAGCGAATCGAACATCAGGTTATGGCTTGGTGACTAACATAATCAATGGTGGACTTGAATGTGGGATTCCTGGTGATGCAAGAGTCAATGATCGGATTGGGTTTTTCCAAAGATATACAAAGTTGTTCAACGTGGACACTGGACCTAACTTGGATTGTGCATATCAGCAACCCTTCTAA 846 0.4539 MTSSFFPILPFFSTLLVFSFALLFSAPFGAEAWSKPNIPISSLITKSLFDSFFLHKDDTACPAKDFYTYDSFIRASKSFPAFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDSTNTQWPCFPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSVIAFKSGLWFWMTEQKPKPSCHDVMVGKYVATEADIAANRTSGYGLVTNIINGGLECGIPGDARVNDRIGFFQRYTKLFNVDTGPNLDCAYQQPF* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00919 281 FunFam Endochitinase (Chitinase) 126 184 - -
Lapu6g00919 281 Pfam Chitinase class I 43 275 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lapu6g00919 281 CDD chitinase_GH19 44 275 - -
Lapu6g00919 281 ProSitePatterns Chitinases family 19 signature 1. 61 83 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lapu6g00919 281 Gene3D - 47 281 - -
Lapu6g00919 281 ProSitePatterns Chitinases family 19 signature 2. 188 198 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lapu6g00919 281 PANTHER CHITINASE-RELATED 36 279 - -
Lapu6g00919 281 SUPERFAMILY Lysozyme-like 40 281 IPR023346 -
Lapu6g00919 281 PIRSF Endochitinase 23 281 IPR016283 GO:0004568|GO:0005975
Lapu6g00919 281 Gene3D Endochitinase, domain 2 126 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00919 Lapu-Chr6 9356348 9357953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00919 39 281 Glycoside Hydrolase AT4G01700 74.486 2.45e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00919 - - gmx:100784196 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00919 6 9356348 9357953 Lapu7g00502 7 5673931 5674933 PCT