Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00462 ATGAATCACACTGAAATCCTAACCAGGTCGTTCTTCTACTTTCCAGTTACACTCTCTGGTCGTTCTTCTACTTTCCAGTTACACTCTCTGATAATGGCCAAGGAAGCTTCTCTGTGCTTCTTGTTTCTCTCCTTTCTCGTTATCTCCTGCTCTGGATTTCTGGTGGGTATTTCCTACCGCGAGAGTGGAAACACTTCAACATCTGCTAGAACCATATCATTCCTCAAGCAAAAGAACGTTTCCTCGTCTCAGATTCGAATTTTTGTTACAGATCACAGAATTTTGAGTACTCTCGGCAACTCCGTCGTGCAAACTGATTTGTACTTGAACAGAAGTCAAGTTCAAAGTTTAATTACTTCAAAACCCTCAGAACTAAAAGTTCGTCTACTCAACTTTCTCCCGTATTCAAACATCAAAAGCATCATTGCTAGCTGTGGCAGTGAGTGCTTAGCACAAAATGAAATGCCTTCGTTCTTACATGCTTTGAAATCAATTGGTTCAGTTCTCAGAGAGCTTCACATAGGGAGGGAGGTAAAAATCTCAGTAGCATTTCCACTTTCACTCTTAGAAAAGTTGAATACAACACAAGAAAATAGTATTCGTAGGATTCTTTCATTTATAAGGGAAATGAAATCCTTTGTAATGGTAGAAGACAGCATTGATGGAGAATTAAGCATGGAGAGTCACTTTGTTCATGCTATAATCAAACGAGCCAGTCTTGCCGCTTCCATTCTTCCTTGCAAAGATGTTCCTATTGTTTTAACAATCAAGAGCACACCTGTCCCCACTTCAATGGAATTAGCTCAATTTAGTGAGAAGGTATCCAAATATCTAGAAGCAAAAACTCATATTACAAAAAGAATAGCTGCATTATATGCAGAGGTGCATAGAACAGAAGATTTTGCAAGTAAAGAACAAGAGGAAGAACTGTTTCCTGTGTCCCCCAGAGAAATGTCTAGTAAATCGCATAAAAGGAGAAGTCTAGATGATACAACCAGCCCAACAAACACAGTTTTCCCCACAAATCCAGCATCATCCACGCCAATCATCACACCCCCAGATACACCAACCATCATCACAGTTCCTGCGACAAATCCTGTCACAATTTCCCCTTCCAATCCTGCTGGAATGCCTGTGACAGTTCCTTCTACCACCCCTGTGCCTTTTCCTCCCACAAATCCAGCCAATACACCAGTACCAGTGAGTAATCCGGCTACAACAACTCCTGTAGGGATACCACCGCCAATAACCAATCCTGTGACCTCTTATCCACCTCCATCAGGAAATGTTCCTGTTACAAATCCCCAACCTCAACCACCTCCTGCAAACACTAATGCTCCAGCCATTCAGGGGCAGAGTTGGTGTGTGGCAAAGCAAGGAGCTCCTGAAGCTTCTCTTCAAGCAGCACTAGACTATGCTTGTGGAATGGGTGGGTCAGATTGTTCTCAAATCCAGCAGGGTGGGAGTTGTTACAGTCCAGTTACATTGCAGAACCATGCTTCTTTTGCCTTTAACAGCTACTATCAAAAGAATCCAGCTCCAACAAGCTGCGACTTTGGAGGAACTGCCACCTTAGTTAACACAAATCCAAGTTCTGGTTCATGCGTTTTCTCATCCTCATCGTCATCAACAATAACAACGCCAAAGTCATCATCTCCAACACCACCTACGCAATCAAGTCCAACACTACCACCACCAAGTCCAGTAATACCTGCACCGTCAATGCCAACAGCACCACCAACTACATCAGTAACAGGCCCATTCGGGTATGGTACTCCACCTTCAGTGTTAAATTCAAGCAACCCCGCGTCAGGTACAATGCCAGAGTTTGGGTCTGAAAGCCCTCCTGTTGTAAATACAACGTCAGCCTCTCGTTCTATGAGTTTGAGACCTTTTGTTAGCTGCATTGTTCTGATAGTTTCATTTGTCACTACGAGACTCAGTATGCACCCATAG 1956 0.4325 MNHTEILTRSFFYFPVTLSGRSSTFQLHSLIMAKEASLCFLFLSFLVISCSGFLVGISYRESGNTSTSARTISFLKQKNVSSSQIRIFVTDHRILSTLGNSVVQTDLYLNRSQVQSLITSKPSELKVRLLNFLPYSNIKSIIASCGSECLAQNEMPSFLHALKSIGSVLRELHIGREVKISVAFPLSLLEKLNTTQENSIRRILSFIREMKSFVMVEDSIDGELSMESHFVHAIIKRASLAASILPCKDVPIVLTIKSTPVPTSMELAQFSEKVSKYLEAKTHITKRIAALYAEVHRTEDFASKEQEEELFPVSPREMSSKSHKRRSLDDTTSPTNTVFPTNPASSTPIITPPDTPTIITVPATNPVTISPSNPAGMPVTVPSTTPVPFPPTNPANTPVPVSNPATTTPVGIPPPITNPVTSYPPPSGNVPVTNPQPQPPPANTNAPAIQGQSWCVAKQGAPEASLQAALDYACGMGGSDCSQIQQGGSCYSPVTLQNHASFAFNSYYQKNPAPTSCDFGGTATLVNTNPSSGSCVFSSSSSSTITTPKSSSPTPPTQSSPTLPPPSPVIPAPSMPTAPPTTSVTGPFGYGTPPSVLNSSNPASGTMPEFGSESPPVVNTTSASRSMSLRPFVSCIVLIVSFVTTRLSMHP* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00462 651 Gene3D - 448 551 - -
Lapu7g00462 651 MobiDBLite consensus disorder prediction 331 345 - -
Lapu7g00462 651 MobiDBLite consensus disorder prediction 537 618 - -
Lapu7g00462 651 SMART X8_cls 453 537 IPR012946 -
Lapu7g00462 651 Pfam X8 domain 454 524 IPR012946 -
Lapu7g00462 651 MobiDBLite consensus disorder prediction 581 618 - -
Lapu7g00462 651 PRINTS Proline rich extensin signature 331 343 - -
Lapu7g00462 651 PRINTS Proline rich extensin signature 384 400 - -
Lapu7g00462 651 PRINTS Proline rich extensin signature 401 418 - -
Lapu7g00462 651 PRINTS Proline rich extensin signature 362 383 - -
Lapu7g00462 651 PRINTS Proline rich extensin signature 419 444 - -
Lapu7g00462 651 Gene3D Glycosidases 55 219 - -
Lapu7g00462 651 MobiDBLite consensus disorder prediction 303 353 - -
Lapu7g00462 651 MobiDBLite consensus disorder prediction 554 580 - -
Lapu7g00462 651 MobiDBLite consensus disorder prediction 303 330 - -
Lapu7g00462 651 MobiDBLite consensus disorder prediction 537 553 - -
Lapu7g00462 651 FunFam Glucan endo-1,3-beta-glucosidase 4 448 541 - -
Lapu7g00462 651 PANTHER BETA-1,3 GLUCANASE 449 544 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00462 Lapu-Chr7 5262467 5265766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00462 415 537 Glycoside Hydrolase AT2G05790 47.619 4.03e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00462 - - gmx:100781884 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00462 7 5262467 5265766 Lapu7g00462 7 5262467 5265766 ECH
Lapu6g00956 6 9745890 9748359 Lapu7g00462 7 5262467 5265766 PCT